Difference between revisions of "CPD-709"

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(Created page with "Category:gene == Gene SJ16475 == * transcription-direction: ** positive * right-end-position: ** 49104 * left-end-position: ** 40372 * centisome-position: ** 14.320985...")
(Created page with "Category:metabolite == Metabolite CPD-709 == * common-name: ** (5α)-campestan-3-one * smiles: ** cc(c)c(c)ccc(c)[ch]3(cc[ch]4([ch]2(cc[ch]1(cc(=o)ccc(c)1[ch]2ccc(c)3...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ16475 ==
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== Metabolite CPD-709 ==
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* transcription-direction:
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* common-name:
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** positive
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** (5α)-campestan-3-one
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* right-end-position:
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* smiles:
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** 49104
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** cc(c)c(c)ccc(c)[ch]3(cc[ch]4([ch]2(cc[ch]1(cc(=o)ccc(c)1[ch]2ccc(c)34))))
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* left-end-position:
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* inchi-key:
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** 40372
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** ddjmomhmvfxeqf-jbqstxlysa-n
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* centisome-position:
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* molecular-weight:
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** 14.320985   
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** 400.687
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-711]]
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* [[1.1.1.8-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=(5α)-campestan-3-one}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=ddjmomhmvfxeqf-jbqstxlysa-n}}
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** Category: [[orthology]]
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{{#set: molecular-weight=400.687}}
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[GLYC3PDEHYDROGBIOSYN-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-6118]]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7385]]
 
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** '''7''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-7411]]
 
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-7902]]
 
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** '''2''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-5981]]
 
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** '''3''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY0-1319]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-5667]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=49104}}
 
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{{#set: left-end-position=40372}}
 
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{{#set: centisome-position=14.320985    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=2}}
 
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{{#set: nb pathway associated=7}}
 

Latest revision as of 11:12, 18 March 2021

Metabolite CPD-709

  • common-name:
    • (5α)-campestan-3-one
  • smiles:
    • cc(c)c(c)ccc(c)[ch]3(cc[ch]4([ch]2(cc[ch]1(cc(=o)ccc(c)1[ch]2ccc(c)34))))
  • inchi-key:
    • ddjmomhmvfxeqf-jbqstxlysa-n
  • molecular-weight:
    • 400.687

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-709&oldid=137473"