Difference between revisions of "CPD-7275"

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(Created page with "Category:gene == Gene SJ19253 == * transcription-direction: ** positive * right-end-position: ** 54724 * left-end-position: ** 49121 * centisome-position: ** 21.440668...")
(Created page with "Category:metabolite == Metabolite CPD-7275 == * common-name: ** (24r,25r)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl coa * smiles: ** cc(ccc(o)c(c)c(...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ19253 ==
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== Metabolite CPD-7275 ==
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* transcription-direction:
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* common-name:
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** positive
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** (24r,25r)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl coa
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* right-end-position:
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* smiles:
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** 54724
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** cc(ccc(o)c(c)c(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o)[ch]4(cc[ch]5(c(c)4c(o)c[ch]6([ch]5c(o)c[ch]7(c(c)6ccc(o)c7))))
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* left-end-position:
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* inchi-key:
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** 49121
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** pxhzoqnodupjkc-mtlgcjaasa-j
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* centisome-position:
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* molecular-weight:
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** 21.440668   
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** 1212.144
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[1.17.99.3-RXN]]
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== Reaction(s) associated ==
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* [[4.2.1.107-RXN]]
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* [[RXN-15561]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[1.17.99.3-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[4.2.1.107-RXN]]
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=(24r,25r)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl coa}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=pxhzoqnodupjkc-mtlgcjaasa-j}}
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== Pathway(s) associated ==
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{{#set: molecular-weight=1212.144}}
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* [[PWY-7511]]
 
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** '''7''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=54724}}
 
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{{#set: left-end-position=49121}}
 
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{{#set: centisome-position=21.440668    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=2}}
 
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{{#set: nb pathway associated=1}}
 

Latest revision as of 11:12, 18 March 2021

Metabolite CPD-7275

  • common-name:
    • (24r,25r)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl coa
  • smiles:
    • cc(ccc(o)c(c)c(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o)[ch]4(cc[ch]5(c(c)4c(o)c[ch]6([ch]5c(o)c[ch]7(c(c)6ccc(o)c7))))
  • inchi-key:
    • pxhzoqnodupjkc-mtlgcjaasa-j
  • molecular-weight:
    • 1212.144

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-7275&oldid=137195"