Difference between revisions of "CPD-7598"

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(Created page with "Category:gene == Gene SJ18471 == * transcription-direction: ** negative * right-end-position: ** 230453 * left-end-position: ** 211671 * centisome-position: ** 86.64885...")
 
(Created page with "Category:gene == Gene SJ18340 == * transcription-direction: ** negative * right-end-position: ** 152919 * left-end-position: ** 132502 * centisome-position: ** 53.309357...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18471 ==
+
== Gene SJ18340 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 230453
+
** 152919
 
* left-end-position:
 
* left-end-position:
−
** 211671
+
** 132502
 
* centisome-position:
 
* centisome-position:
−
** 86.64885    
+
** 53.309357    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ACONITATEDEHYDR-RXN]]
+
* [[CHOLINE-KINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[ACONITATEHYDR-RXN]]
+
* [[ETHANOLAMINE-KINASE-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14047]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7782]]
−
* [[TCA]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6549]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5392]]
 
−
** '''6''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5690]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[P105-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[REDCITCYC]]
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY66-398]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-7254]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6969]]
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
* [[FERMENTATION-PWY]]
 
 
** '''11''' reactions found over '''16''' reactions in the full pathway
 
** '''11''' reactions found over '''16''' reactions in the full pathway
−
* [[GLYOXYLATE-BYPASS]]
+
* [[PWY3O-450]]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5750]]
+
* [[PWY-7818]]
−
** '''3''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''19''' reactions in the full pathway
−
* [[PWY-5913]]
+
* [[PWY-7886]]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[P23-PWY]]
+
* [[PWY-3385]]
−
** '''9''' reactions found over '''12''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7124]]
+
* [[PWY4FS-6]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6728]]
 
−
** '''11''' reactions found over '''19''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=230453}}
+
{{#set: right-end-position=152919}}
−
{{#set: left-end-position=211671}}
+
{{#set: left-end-position=132502}}
−
{{#set: centisome-position=86.64885   }}
+
{{#set: centisome-position=53.309357   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=16}}
+
{{#set: nb pathway associated=6}}

Revision as of 14:23, 26 August 2019

Gene SJ18340

  • transcription-direction:
    • negative
  • right-end-position:
    • 152919
  • left-end-position:
    • 132502
  • centisome-position:
    • 53.309357

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway
  • PWY3O-450
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7818
    • 2 reactions found over 19 reactions in the full pathway
  • PWY-7886
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3385
    • 2 reactions found over 6 reactions in the full pathway
  • PWY4FS-6
    • 3 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-7598&oldid=20501"