Difference between revisions of "CPD-8159"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-SYNTH-BASE-RXN 3-OXOACYL-ACP-SYNTH-BASE-RXN] == * direction: ** left-to-right * commo...")
 
(Created page with "Category:metabolite == Metabolite CPD-8159 == * common-name: ** 1-palmitoyl-2-α-linolenoyl-phosphatidylcholine * smiles: ** ccc=ccc=ccc=ccccccccc(=o)oc(coc(=o)cccccc...")
 
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-SYNTH-BASE-RXN 3-OXOACYL-ACP-SYNTH-BASE-RXN] ==
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== Metabolite CPD-8159 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** fatty acid synthase
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** 1-palmitoyl-2-α-linolenoyl-phosphatidylcholine
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
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** ccc=ccc=ccc=ccccccccc(=o)oc(coc(=o)ccccccccccccccc)cop(=o)([o-])occ[n+](c)(c)c
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** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
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* inchi-key:
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** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
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** jmaydgbzrhqjat-qwfqjeorsa-n
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** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
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* molecular-weight:
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== Reaction formula ==
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** 756.054
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* 1 [[ACETYL-ACP]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[Acetoacetyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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== Reaction(s) known to consume the compound ==
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== Gene(s) associated with this reaction  ==
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== Reaction(s) known to produce the compound ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN-8361]]
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* Gene: [[SJ18059]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=1-palmitoyl-2-&alpha;-linolenoyl-phosphatidylcholine}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: inchi-key=inchikey=jmaydgbzrhqjat-qwfqjeorsa-n}}
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* Gene: [[SJ06616]]
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{{#set: molecular-weight=756.054}}
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ19629]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ00613]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ06617]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ00320]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ04769]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ11672]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ00005]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ10624]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ17743]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ15984]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ15983]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ03883]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ06944]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ13014]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ04443]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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</div>
 
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== Pathway(s) ==
 
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* [[PWY-5966]], fatty acid biosynthesis initiation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5966 PWY-5966]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-5965]], fatty acid biosynthesis initiation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5965 PWY-5965]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[FASYN-INITIAL-PWY]], superpathway of fatty acid biosynthesis initiation (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY]
 
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** '''5''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
 
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** '''7''' reactions found over '''9''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P23902 P23902]
 
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** [http://www.uniprot.org/uniprot/P0A6R0 P0A6R0]
 
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** [http://www.uniprot.org/uniprot/P49327 P49327]
 
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** [http://www.uniprot.org/uniprot/P43710 P43710]
 
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** [http://www.uniprot.org/uniprot/Q9HYR2 Q9HYR2]
 
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** [http://www.uniprot.org/uniprot/O67612 O67612]
 
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** [http://www.uniprot.org/uniprot/P20582 P20582]
 
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** [http://www.uniprot.org/uniprot/Q9JT63 Q9JT63]
 
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** [http://www.uniprot.org/uniprot/Q9JW56 Q9JW56]
 
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** [http://www.uniprot.org/uniprot/Q9PMZ6 Q9PMZ6]
 
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** [http://www.uniprot.org/uniprot/P43711 P43711]
 
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** [http://www.uniprot.org/uniprot/O25284 O25284]
 
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** [http://www.uniprot.org/uniprot/Q9JX65 Q9JX65]
 
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** [http://www.uniprot.org/uniprot/O34340 O34340]
 
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** [http://www.uniprot.org/uniprot/Q9PI63 Q9PI63]
 
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** [http://www.uniprot.org/uniprot/P0AAI5 P0AAI5]
 
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** [http://www.uniprot.org/uniprot/Q07510 Q07510]
 
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** [http://www.uniprot.org/uniprot/Q06097 Q06097]
 
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** [http://www.uniprot.org/uniprot/P41175 P41175]
 
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** [http://www.uniprot.org/uniprot/P31176 P31176]
 
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** [http://www.uniprot.org/uniprot/Q40027 Q40027]
 
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** [http://www.uniprot.org/uniprot/Q40028 Q40028]
 
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** [http://www.uniprot.org/uniprot/P73283 P73283]
 
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** [http://www.uniprot.org/uniprot/P0A953 P0A953]
 
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** [http://www.uniprot.org/uniprot/O64485 O64485]
 
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** [http://www.uniprot.org/uniprot/O65677 O65677]
 
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** [http://www.uniprot.org/uniprot/Q39310 Q39310]
 
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** [http://www.uniprot.org/uniprot/O23738 O23738]
 
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** [http://www.uniprot.org/uniprot/Q41134 Q41134]
 
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** [http://www.uniprot.org/uniprot/Q41135 Q41135]
 
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** [http://www.uniprot.org/uniprot/Q54208 Q54208]
 
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** [http://www.uniprot.org/uniprot/O54440 O54440]
 
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** [http://www.uniprot.org/uniprot/P55338 P55338]
 
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** [http://www.uniprot.org/uniprot/Q9RA31 Q9RA31]
 
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** [http://www.uniprot.org/uniprot/P12276 P12276]
 
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** [http://www.uniprot.org/uniprot/P12785 P12785]
 
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</div>
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=fatty acid synthase}}
 
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{{#set: ec-number=ec-2.3.1.85|ec-2.3.1.41|ec-2.3.1.179|ec-2.3.1.86}}
 
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{{#set: nb gene associated=17}}
 
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{{#set: nb pathway associated=4}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pathwaytools|pantograph}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:16, 18 March 2021

Metabolite CPD-8159

  • common-name:
    • 1-palmitoyl-2-α-linolenoyl-phosphatidylcholine
  • smiles:
    • ccc=ccc=ccc=ccccccccc(=o)oc(coc(=o)ccccccccccccccc)cop(=o)([o-])occ[n+](c)(c)c
  • inchi-key:
    • jmaydgbzrhqjat-qwfqjeorsa-n
  • molecular-weight:
    • 756.054

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-8159&oldid=139245"