Difference between revisions of "CPD-8162"

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(Created page with "Category:gene == Gene SJ04962 == * transcription-direction: ** positive * right-end-position: ** 347786 * left-end-position: ** 337319 * centisome-position: ** 34.93239...")
 
(Created page with "Category:metabolite == Metabolite CPD-8162 == * common-name: ** 1-18:3-2-16:0-digalactosyldiacylglycerol * smiles: ** ccc=ccc=ccc=ccccccccc(occ(coc2(oc(coc1(oc(co)c(o)c(o)...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ04962 ==
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== Metabolite CPD-8162 ==
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* transcription-direction:
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* common-name:
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** positive
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** 1-18:3-2-16:0-digalactosyldiacylglycerol
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* right-end-position:
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* smiles:
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** 347786
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** ccc=ccc=ccc=ccccccccc(occ(coc2(oc(coc1(oc(co)c(o)c(o)c(o)1))c(o)c(o)c(o)2))oc(=o)ccccccccccccccc)=o
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* left-end-position:
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* inchi-key:
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** 337319
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** ijezfjfcqwykem-hzdsjjkasa-n
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* centisome-position:
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* molecular-weight:
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** 34.93239   
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** 915.209
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-8364]]
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* [[RXN-12496]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=1-18:3-2-16:0-digalactosyldiacylglycerol}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=ijezfjfcqwykem-hzdsjjkasa-n}}
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* [[RXN1F-150]]
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{{#set: molecular-weight=915.209}}
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN1F-151]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-7591]]
 
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** '''1''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-7938]]
 
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** '''2''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-7939]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-5943]]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=347786}}
 
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{{#set: left-end-position=337319}}
 
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{{#set: centisome-position=34.93239    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=3}}
 
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{{#set: nb pathway associated=4}}
 

Latest revision as of 11:11, 18 March 2021

Metabolite CPD-8162

  • common-name:
    • 1-18:3-2-16:0-digalactosyldiacylglycerol
  • smiles:
    • ccc=ccc=ccc=ccccccccc(occ(coc2(oc(coc1(oc(co)c(o)c(o)c(o)1))c(o)c(o)c(o)2))oc(=o)ccccccccccccccc)=o
  • inchi-key:
    • ijezfjfcqwykem-hzdsjjkasa-n
  • molecular-weight:
    • 915.209

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-8162&oldid=136854"