Difference between revisions of "CPD-8163"

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(Created page with "Category:gene == Gene SJ00780 == * transcription-direction: ** positive * right-end-position: ** 42185 * left-end-position: ** 15261 * centisome-position: ** 9.450237...")
 
(Created page with "Category:metabolite == Metabolite CPD-8163 == * common-name: ** 1-16:0-2-18:2-digalactosyldiacylglycerol * smiles: ** cccccc=ccc=ccccccccc(oc(coc2(oc(coc1(oc(co)c(o)c(o)c(...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ00780 ==
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== Metabolite CPD-8163 ==
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* transcription-direction:
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* common-name:
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** positive
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** 1-16:0-2-18:2-digalactosyldiacylglycerol
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* right-end-position:
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* smiles:
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** 42185
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** cccccc=ccc=ccccccccc(oc(coc2(oc(coc1(oc(co)c(o)c(o)c(o)1))c(o)c(o)c(o)2))coc(=o)ccccccccccccccc)=o
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* left-end-position:
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* inchi-key:
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** 15261
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** qzxmupatkglzap-gnspkctrsa-n
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* centisome-position:
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* molecular-weight:
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** 9.450237   
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** 917.225
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-8365]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[1.2.1.18-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=1-16:0-2-18:2-digalactosyldiacylglycerol}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=qzxmupatkglzap-gnspkctrsa-n}}
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* [[1.2.1.27-RXN]]
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{{#set: molecular-weight=917.225}}
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-11213]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-2902]]
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-9958]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-5642]]
 
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** '''1''' reactions found over '''7''' reactions in the full pathway
 
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* [[VALDEG-PWY]]
 
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** '''6''' reactions found over '''8''' reactions in the full pathway
 
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* [[BETA-ALA-DEGRADATION-I-PWY]]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7574]]
 
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** '''3''' reactions found over '''5''' reactions in the full pathway
 
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* [[P562-PWY]]
 
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** '''2''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-1781]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-6373]]
 
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** '''1''' reactions found over '''4''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=42185}}
 
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{{#set: left-end-position=15261}}
 
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{{#set: centisome-position=9.450237    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=7}}
 

Latest revision as of 11:13, 18 March 2021

Metabolite CPD-8163

  • common-name:
    • 1-16:0-2-18:2-digalactosyldiacylglycerol
  • smiles:
    • cccccc=ccc=ccccccccc(oc(coc2(oc(coc1(oc(co)c(o)c(o)c(o)1))c(o)c(o)c(o)2))coc(=o)ccccccccccccccc)=o
  • inchi-key:
    • qzxmupatkglzap-gnspkctrsa-n
  • molecular-weight:
    • 917.225

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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