Difference between revisions of "CPD-8621"

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(Created page with "Category:gene == Gene SJ11330 == * transcription-direction: ** negative * right-end-position: ** 189871 * left-end-position: ** 182582 * centisome-position: ** 48.880272...")
(Created page with "Category:gene == Gene SJ07072 == * transcription-direction: ** negative * right-end-position: ** 318235 * left-end-position: ** 304028 * centisome-position: ** 65.47474...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11330 ==
+
== Gene SJ07072 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 189871
+
** 318235
 
* left-end-position:
 
* left-end-position:
−
** 182582
+
** 304028
 
* centisome-position:
 
* centisome-position:
−
** 48.880272    
+
** 65.47474    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[ALDHDEHYDROG-RXN]]
+
* [[2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[BADH-RXN]]
+
* [[ADOMET-DMK-METHYLTRANSFER-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[R222-RXN]]
+
* [[RXN-11046]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10089]]
+
* [[RXN-11754]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10715]]
+
* [[RXN-14177]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10780]]
+
* [[RXN-9191]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10912]]
+
* [[RXN-9205]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10917]]
+
* [[RXN-9220]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14224]]
+
* [[RXN-9227]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14225]]
+
* [[RXN-9235]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14280]]
+
* [[RXN-9242]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-16653]]
+
* [[RXN-9361]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-16654]]
+
* [[RXN-9362]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-16655]]
+
* [[RXN-9363]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-16656]]
+
* [[RXN-9366]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17808]]
+
* [[RXN3O-54]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-3443]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-37]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-4142]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9758]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-3]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-472]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-476]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-479]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN6666-5]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 91: Line 64:
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PWY-7269]]
+
* [[PWY-6708]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''5''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY1F-353]]
+
* [[PWY-5870]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
* [[BETSYN-PWY]]
+
* [[MENAQUINONESYN-PWY]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[CHOLINE-BETAINE-ANA-PWY]]
+
* [[PWY-5839]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-3722]]
 
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7494]]
+
* [[PWY-5844]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5849]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5855]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5873]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5857]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5872]]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5856]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5871]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5890]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5891]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5892]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[P221-PWY]]
+
* [[PWY-5895]]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6181]]
+
* [[PWY-7230]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6307]]
+
* [[PWY-7233]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-6313]]
+
* [[PWY3O-19]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6342]]
 
−
** '''8''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-2221]]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-0]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-2724]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-2501]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6054]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6055]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7387]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY66-21]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY66-162]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY66-161]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY66-387]]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY66-388]]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY66-389]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY6666-2]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7431]]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
 
</div>
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=189871}}
+
{{#set: right-end-position=318235}}
−
{{#set: left-end-position=182582}}
+
{{#set: left-end-position=304028}}
−
{{#set: centisome-position=48.880272   }}
+
{{#set: centisome-position=65.47474   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=25}}
+
{{#set: nb reaction associated=16}}
−
{{#set: nb pathway associated=26}}
+
{{#set: nb pathway associated=19}}

Revision as of 09:27, 27 August 2019

Gene SJ07072

  • transcription-direction:
    • negative
  • right-end-position:
    • 318235
  • left-end-position:
    • 304028
  • centisome-position:
    • 65.47474

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6708
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-5870
    • 4 reactions found over 9 reactions in the full pathway
  • MENAQUINONESYN-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5839
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5844
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5849
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5855
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5873
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5857
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5872
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-5856
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5871
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5890
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5891
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5892
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5895
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7230
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-7233
    • 3 reactions found over 10 reactions in the full pathway
  • PWY3O-19
    • 4 reactions found over 8 reactions in the full pathway




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