Difference between revisions of "CPD-8901"

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(Created page with "Category:gene == Gene SJ08230 == * transcription-direction: ** negative * right-end-position: ** 52222 * left-end-position: ** 49666 * centisome-position: ** 88.21356...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AKBLIG-RXN AKBLIG-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/E...")
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[[Category:gene]]
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[[Category:reaction]]
== Gene SJ08230 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AKBLIG-RXN AKBLIG-RXN] ==
* transcription-direction:
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* direction:
** negative
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** left-to-right
* right-end-position:
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* ec-number:
** 52222
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** [http://enzyme.expasy.org/EC/2.3.1.29 ec-2.3.1.29]
* left-end-position:
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== Reaction formula ==
** 49666
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* 1 [[AMINO-OXOBUT]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[GLY]][c]
* centisome-position:
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== Gene(s) associated with this reaction  ==
** 88.21356   
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* Gene: [[SJ01689]]
== Organism(s) associated with this gene  ==
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** Category: [[orthology]]
* [[S.japonica_carotenoid_curated]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
== Reaction(s) associated ==
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== Pathway(s) ==
* [[3.5.1.26-RXN]]
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* [[THREONINE-DEG2-PWY]], L-threonine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=THREONINE-DEG2-PWY THREONINE-DEG2-PWY]
** Category: [[annotation]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reconstruction information  ==
== Pathway(s) associated ==
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* [[ASPARAGINE-DEG1-PWY-1]]
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== External links  ==
** '''3''' reactions found over '''3''' reactions in the full pathway
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* LIGAND-RXN:
{{#set: transcription-direction=negative}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00371 R00371]
{{#set: right-end-position=52222}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00370 R00370]
{{#set: left-end-position=49666}}
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* RHEA:
{{#set: centisome-position=88.21356    }}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20736 20736]
{{#set: organism associated=S.japonica_carotenoid_curated}}
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* UNIPROT:
{{#set: nb reaction associated=1}}
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** [http://www.uniprot.org/uniprot/Q9RRY6 Q9RRY6]
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** [http://www.uniprot.org/uniprot/O58030 O58030]
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** [http://www.uniprot.org/uniprot/Q9UY32 Q9UY32]
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** [http://www.uniprot.org/uniprot/O31777 O31777]
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** [http://www.uniprot.org/uniprot/Q22768 Q22768]
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** [http://www.uniprot.org/uniprot/P0AB77 P0AB77]
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{{#set: direction=left-to-right}}
 +
{{#set: ec-number=ec-2.3.1.29}}
 +
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 09:28, 27 August 2019

Reaction AKBLIG-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links