Difference between revisions of "CPD-9007"

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(Created page with "Category:gene == Gene SJ18341 == * transcription-direction: ** positive * right-end-position: ** 179822 * left-end-position: ** 154126 * centisome-position: ** 62.00931...")
(Created page with "Category:metabolite == Metabolite CPD-9007 == * common-name: ** adp ribose 1'',2''-cyclic phosphate * smiles: ** c(c3(c(c(c(n2(c1(=c(c(=nc=n1)n)n=c2)))o3)o)o))op(op(=o)([o...")
 
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ18341 ==
+
== Metabolite CPD-9007 ==
* transcription-direction:
+
* common-name:
** positive
+
** adp ribose 1'',2''-cyclic phosphate
* right-end-position:
+
* smiles:
** 179822
+
** c(c3(c(c(c(n2(c1(=c(c(=nc=n1)n)n=c2)))o3)o)o))op(op(=o)([o-])occ5(c(o)c4(c(op([o-])(=o)o4)o5)))([o-])=o
* left-end-position:
+
* inchi-key:
** 154126
+
** npspryxpogpcpm-tyasjmozsa-k
* centisome-position:
+
* molecular-weight:
** 62.00931   
+
** 618.26
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
+
== Reaction(s) known to produce the compound ==
== Reaction(s) associated ==
+
* [[2.7.1.160-RXN]]
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
== Reaction(s) of unknown directionality ==
* [[ADENYL-KIN-RXN]]
+
{{#set: common-name=adp ribose 1'',2''-cyclic phosphate}}
** Category: [[orthology]]
+
{{#set: inchi-key=inchikey=npspryxpogpcpm-tyasjmozsa-k}}
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
{{#set: molecular-weight=618.26}}
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[GLUC1PURIDYLTRANS-RXN]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[PGCM]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[PGMTh]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[PHOSPHOGLUCMUT-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-14456]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-16997]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-16998]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* [[PWY-7219]]
 
** '''4''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7817]]
 
** '''6''' reactions found over '''16''' reactions in the full pathway
 
* [[PWY-7238]]
 
** '''5''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-6527]]
 
** '''7''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-3801]]
 
** '''4''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7343]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6737]]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
* [[GLYCOGENSYNTH-PWY]]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
* [[GLUCOSE1PMETAB-PWY]]
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7900]]
 
** '''2''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-6731]]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-5941]]
 
** '''3''' reactions found over '''6''' reactions in the full pathway
 
* [[GLYCOCAT-PWY]]
 
** '''6''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-622]]
 
** '''2''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-6317]]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-2723]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-5940]]
 
** '''2''' reactions found over '''18''' reactions in the full pathway
 
* [[PWY-7902]]
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-5384]]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-5661]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY66-422]]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=179822}}
 
{{#set: left-end-position=154126}}
 
{{#set: centisome-position=62.00931    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=8}}
 
{{#set: nb pathway associated=21}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite CPD-9007

  • common-name:
    • adp ribose 1,2-cyclic phosphate
  • smiles:
    • c(c3(c(c(c(n2(c1(=c(c(=nc=n1)n)n=c2)))o3)o)o))op(op(=o)([o-])occ5(c(o)c4(c(op([o-])(=o)o4)o5)))([o-])=o
  • inchi-key:
    • npspryxpogpcpm-tyasjmozsa-k
  • molecular-weight:
    • 618.26

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality