Difference between revisions of "CPD-9098"

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(Created page with "Category:gene == Gene SJ07399 == * transcription-direction: ** negative * right-end-position: ** 44013 * left-end-position: ** 34598 * centisome-position: ** 50.848007...")
 
(Created page with "Category:metabolite == Metabolite CPD-9098 == * common-name: ** geranylgeranyl bacteriopheophytin * smiles: ** ccc1(c(c3(n=c1c=c2(nc6(c(=c2c)c([c-](c(c5(=nc(=cc4(nc(c=3)=c...")
 
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ07399 ==
+
== Metabolite CPD-9098 ==
* transcription-direction:
+
* common-name:
** negative
+
** geranylgeranyl bacteriopheophytin
* right-end-position:
+
* smiles:
** 44013
+
** ccc1(c(c3(n=c1c=c2(nc6(c(=c2c)c([c-](c(c5(=nc(=cc4(nc(c=3)=c(c=4c)c(=o)c))c(c5ccc(=o)occ=c(ccc=c(ccc=c(ccc=c(c)c)c)c)c)c))=6)c(oc)=o)=o))))c)
* left-end-position:
+
* inchi-key:
** 34598
+
** ijmymfmuuouget-riziqltbsa-n
* centisome-position:
+
* molecular-weight:
** 50.848007   
+
** 882.173
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
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* [[RXN-17427]]
== Reaction(s) associated ==
+
* [[RXN-8794]]
* [[2.4.1.223-RXN]]
+
== Reaction(s) known to produce the compound ==
** Category: [[annotation]]
+
== Reaction(s) of unknown directionality ==
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: common-name=geranylgeranyl bacteriopheophytin}}
* [[2.4.2.26-RXN]]
+
{{#set: inchi-key=inchikey=ijmymfmuuouget-riziqltbsa-n}}
** Category: [[annotation]]
+
{{#set: molecular-weight=882.173}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-6558]]
 
** '''7''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-6557]]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=44013}}
 
{{#set: left-end-position=34598}}
 
{{#set: centisome-position=50.848007    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb pathway associated=2}}
 

Latest revision as of 11:13, 18 March 2021

Metabolite CPD-9098

  • common-name:
    • geranylgeranyl bacteriopheophytin
  • smiles:
    • ccc1(c(c3(n=c1c=c2(nc6(c(=c2c)c([c-](c(c5(=nc(=cc4(nc(c=3)=c(c=4c)c(=o)c))c(c5ccc(=o)occ=c(ccc=c(ccc=c(ccc=c(c)c)c)c)c)c))=6)c(oc)=o)=o))))c)
  • inchi-key:
    • ijmymfmuuouget-riziqltbsa-n
  • molecular-weight:
    • 882.173

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality