Difference between revisions of "CPD-9100"

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(Created page with "Category:gene == Gene SJ11632 == * transcription-direction: ** positive * right-end-position: ** 434439 * left-end-position: ** 430492 * centisome-position: ** 55.235542...")
(Created page with "Category:metabolite == Metabolite CPD-9100 == * common-name: ** tetrahydrogeranylgeranyl bacteriopheophytin * smiles: ** ccc5(c4(=cc6(=c(c)c1(=c(c([c-](c(=o)oc)c(=o)1)=c2(...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ11632 ==
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== Metabolite CPD-9100 ==
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* transcription-direction:
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* common-name:
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** positive
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** tetrahydrogeranylgeranyl bacteriopheophytin
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* right-end-position:
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* smiles:
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** 434439
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** ccc5(c4(=cc6(=c(c)c1(=c(c([c-](c(=o)oc)c(=o)1)=c2(c(ccc(occ=c(c)cccc(c)cccc(c)ccc=c(c)c)=o)c(c)c(=n2)c=c3(c(c)=c(c(c)=o)c(n3)=cc(=n4)c(c)5)))n6))))
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* left-end-position:
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* inchi-key:
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** 430492
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** zodfiocmoawrmb-zasykxldsa-n
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* centisome-position:
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* molecular-weight:
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** 55.235542   
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** 886.205
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-8796]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[PANTOTHENATE-KIN-RXN]]
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* [[RXN-8795]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=tetrahydrogeranylgeranyl bacteriopheophytin}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=zodfiocmoawrmb-zasykxldsa-n}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: molecular-weight=886.205}}
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== Pathway(s) associated ==
 
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* [[PWY-3961]]
 
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** '''1''' reactions found over '''3''' reactions in the full pathway
 
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* [[PANTO-PWY]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[COA-PWY-1]]
 
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** '''2''' reactions found over '''1''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=434439}}
 
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{{#set: left-end-position=430492}}
 
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{{#set: centisome-position=55.235542    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=1}}
 
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{{#set: nb pathway associated=3}}
 

Latest revision as of 11:13, 18 March 2021

Metabolite CPD-9100

  • common-name:
    • tetrahydrogeranylgeranyl bacteriopheophytin
  • smiles:
    • ccc5(c4(=cc6(=c(c)c1(=c(c([c-](c(=o)oc)c(=o)1)=c2(c(ccc(occ=c(c)cccc(c)cccc(c)ccc=c(c)c)=o)c(c)c(=n2)c=c3(c(c)=c(c(c)=o)c(n3)=cc(=n4)c(c)5)))n6))))
  • inchi-key:
    • zodfiocmoawrmb-zasykxldsa-n
  • molecular-weight:
    • 886.205

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-9100&oldid=137910"