Difference between revisions of "CPD-9854"

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(Created page with "Category:gene == Gene SJ00348 == * transcription-direction: ** positive * right-end-position: ** 62269 * left-end-position: ** 57108 * centisome-position: ** 33.94376...")
(Created page with "Category:metabolite == Metabolite CPD-9854 == * common-name: ** 3-(all-trans-heptaprenyl)benzene-1,2-diol * smiles: ** cc(c)=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=ccc1(c(o)=...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ00348 ==
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== Metabolite CPD-9854 ==
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* transcription-direction:
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* common-name:
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** positive
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** 3-(all-trans-heptaprenyl)benzene-1,2-diol
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* right-end-position:
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* smiles:
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** 62269
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** cc(c)=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=ccc1(c(o)=c(o)c=cc=1))c)c)c)c)c)c
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* left-end-position:
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* inchi-key:
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** 57108
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** ooykexozubwosx-nfdzfspwsa-n
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* centisome-position:
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* molecular-weight:
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** 33.94376   
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** 586.94
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-9225]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[GAPDHSYNEC-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=3-(all-trans-heptaprenyl)benzene-1,2-diol}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=ooykexozubwosx-nfdzfspwsa-n}}
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* [[GAPOXNPHOSPHN-RXN]]
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{{#set: molecular-weight=586.94}}
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-15115]]
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[GLUCONEO-PWY]]
 
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** '''12''' reactions found over '''13''' reactions in the full pathway
 
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* [[P124-PWY]]
 
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** '''12''' reactions found over '''15''' reactions in the full pathway
 
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* [[P185-PWY]]
 
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** '''11''' reactions found over '''12''' reactions in the full pathway
 
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* [[P122-PWY]]
 
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** '''16''' reactions found over '''18''' reactions in the full pathway
 
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* [[PWY-5484]]
 
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** '''10''' reactions found over '''11''' reactions in the full pathway
 
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* [[PWY-1042]]
 
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** '''9''' reactions found over '''10''' reactions in the full pathway
 
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* [[GLYCOLYSIS]]
 
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** '''11''' reactions found over '''12''' reactions in the full pathway
 
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* [[ANAGLYCOLYSIS-PWY]]
 
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** '''10''' reactions found over '''11''' reactions in the full pathway
 
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* [[SUCSYN-PWY]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY66-399]]
 
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** '''11''' reactions found over '''12''' reactions in the full pathway
 
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* [[PWY-6901]]
 
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** '''10''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7003]]
 
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** '''8''' reactions found over '''6''' reactions in the full pathway
 
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</div>
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=62269}}
 
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{{#set: left-end-position=57108}}
 
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{{#set: centisome-position=33.94376    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=3}}
 
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{{#set: nb pathway associated=12}}
 

Latest revision as of 11:11, 18 March 2021

Metabolite CPD-9854

  • common-name:
    • 3-(all-trans-heptaprenyl)benzene-1,2-diol
  • smiles:
    • cc(c)=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=ccc1(c(o)=c(o)c=cc=1))c)c)c)c)c)c
  • inchi-key:
    • ooykexozubwosx-nfdzfspwsa-n
  • molecular-weight:
    • 586.94

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-9854&oldid=136809"