Difference between revisions of "CPD-9896"

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(Created page with "Category:gene == Gene SJ03828 == * transcription-direction: ** negative * right-end-position: ** 65111 * left-end-position: ** 45355 * centisome-position: ** 39.29187...")
 
(Created page with "Category:metabolite == Metabolite CPD-9896 == * common-name: ** 3,4-dihydroxy-5-all-trans-nonaprenylbenzoate * smiles: ** cc(c)=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=c...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ03828 ==
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== Metabolite CPD-9896 ==
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* transcription-direction:
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* common-name:
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** negative
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** 3,4-dihydroxy-5-all-trans-nonaprenylbenzoate
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* right-end-position:
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* smiles:
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** 65111
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** cc(c)=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=ccc1(=c(c(=cc(c([o-])=o)=c1)o)o))c)c)c)c)c)c)c)c
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* left-end-position:
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* inchi-key:
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** 45355
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** fmsczymouyoenk-opsrswoasa-m
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* centisome-position:
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* molecular-weight:
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** 39.29187   
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** 766.178
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-9281]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[ATPASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=3,4-dihydroxy-5-all-trans-nonaprenylbenzoate}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=fmsczymouyoenk-opsrswoasa-m}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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{{#set: molecular-weight=766.178}}
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12195]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12196]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5462]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=65111}}
 
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{{#set: left-end-position=45355}}
 
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{{#set: centisome-position=39.29187    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=4}}
 

Latest revision as of 11:13, 18 March 2021

Metabolite CPD-9896

  • common-name:
    • 3,4-dihydroxy-5-all-trans-nonaprenylbenzoate
  • smiles:
    • cc(c)=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=ccc1(=c(c(=cc(c([o-])=o)=c1)o)o))c)c)c)c)c)c)c)c
  • inchi-key:
    • fmsczymouyoenk-opsrswoasa-m
  • molecular-weight:
    • 766.178

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-9896&oldid=137560"