Difference between revisions of "CPD-9897"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14037 RXN-14037] == * direction: ** reversible == Reaction formula == * 1 2-ACETO-LACTATE[c...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHAGLYPSYN-RXN PHOSPHAGLYPSYN-RXN] == * direction: ** left-to-right * common-name: ** cdp-diacy...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14037 RXN-14037] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHAGLYPSYN-RXN PHOSPHAGLYPSYN-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** cdp-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.7.8.5 ec-2.7.8.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-ACETO-LACTATE]][c] '''+''' 1 [[THIAMINE-PYROPHOSPHATE]][c] '''<=>''' 1 [[2-ALPHA-HYDROXYETHYL-THPP]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[CDPDIACYLGLYCEROL]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''=>''' 1 [[CMP]][c] '''+''' 1 [[L-1-PHOSPHATIDYL-GLYCEROL-P]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ08733]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5269]], cardiolipin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5269 PWY-5269]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY0-1545]], cardiolipin biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1545 PWY0-1545]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5668]], cardiolipin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5668 PWY-5668]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY4FS-8]], phosphatidylglycerol biosynthesis II (non-plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-8 PWY4FS-8]
 +
** '''3''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY4FS-7]], phosphatidylglycerol biosynthesis I (plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-7 PWY4FS-7]
 +
** '''3''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
 +
** '''6''' reactions found over '''16''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12593 12593]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04672 R04672]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01801 R01801]
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24808 24808]
+
** [http://www.uniprot.org/uniprot/Q9JTH1 Q9JTH1]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/P46322 P46322]
−
{{#set: nb gene associated=0}}
+
** [http://www.uniprot.org/uniprot/P44528 P44528]
−
{{#set: nb pathway associated=0}}
+
** [http://www.uniprot.org/uniprot/P47360 P47360]
−
{{#set: reconstruction category=gap-filling}}
+
** [http://www.uniprot.org/uniprot/Q9PNM7 Q9PNM7]
−
{{#set: reconstruction tool=meneco}}
+
** [http://www.uniprot.org/uniprot/O25660 O25660]
−
{{#set: reconstruction comment=added for gapfilling}}
+
** [http://www.uniprot.org/uniprot/O51663 O51663]
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
** [http://www.uniprot.org/uniprot/O67908 O67908]
 +
** [http://www.uniprot.org/uniprot/Q49839 Q49839]
 +
** [http://www.uniprot.org/uniprot/P75520 P75520]
 +
** [http://www.uniprot.org/uniprot/P74372 P74372]
 +
** [http://www.uniprot.org/uniprot/Q48959 Q48959]
 +
** [http://www.uniprot.org/uniprot/P0ABF8 P0ABF8]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=cdp-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase}}
 +
{{#set: ec-number=ec-2.7.8.5}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=6}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:24, 26 August 2019

Reaction PHOSPHAGLYPSYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • cdp-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5269, cardiolipin biosynthesis II: PWY-5269
    • 3 reactions found over 3 reactions in the full pathway
  • PWY0-1545, cardiolipin biosynthesis III: PWY0-1545
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5668, cardiolipin biosynthesis I: PWY-5668
    • 3 reactions found over 3 reactions in the full pathway
  • PWY4FS-8, phosphatidylglycerol biosynthesis II (non-plastidic): PWY4FS-8
    • 3 reactions found over 2 reactions in the full pathway
  • PWY4FS-7, phosphatidylglycerol biosynthesis I (plastidic): PWY4FS-7
    • 3 reactions found over 2 reactions in the full pathway
  • PWY-7817, type I lipoteichoic acid biosynthesis (S. aureus): PWY-7817
    • 6 reactions found over 16 reactions in the full pathway

Reconstruction information

External links





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