Difference between revisions of "CPD-9958"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-COUMARATE--COA-LIGASE-RXN 4-COUMARATE--COA-LIGASE-RXN] == * direction: ** left-to-right * ec-numb...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7683 RXN-7683] == * direction: ** left-to-right * common-name: ** phytol kinase * ec-number: **...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-COUMARATE--COA-LIGASE-RXN 4-COUMARATE--COA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7683 RXN-7683] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** phytol kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.2.1.12 ec-6.2.1.12]
+
** [http://enzyme.expasy.org/EC/2.7.1.182 ec-2.7.1.182]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[COUMARATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[P-COUMAROYL-COA]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[CTP]][c] '''+''' 1 [[PHYTOL]][c] '''=>''' 1 [[CDP]][c] '''+''' 1 [[CPD-7025]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03066]]
+
* Gene: [[SJ21593]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ16901]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5107]], phytol salvage pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5107 PWY-5107]
−
* [[PWY-7397]], naringenin biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7397 PWY-7397]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6320]], phaselate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6320 PWY-6320]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6435]], 4-hydroxybenzoate biosynthesis III (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6435 PWY-6435]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
 
−
** '''7''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-5135]], xanthohumol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5135 PWY-5135]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7398]], coumarins biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398]
 
−
** '''3''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-7046]], 4-coumarate degradation (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7046 PWY-7046]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7897]], flavonoid di-C-glucosylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7897 PWY-7897]
 
−
** '''3''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-5754]], 4-hydroxybenzoate biosynthesis I (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5754 PWY-5754]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6982]], umbelliferone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6982 PWY-6982]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19642 19642]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=38056 38056]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01616 R01616]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P31684 P31684]
 
−
** [http://www.uniprot.org/uniprot/P31685 P31685]
 
−
** [http://www.uniprot.org/uniprot/Q9SWH8 Q9SWH8]
 
−
** [http://www.uniprot.org/uniprot/Q9SWH7 Q9SWH7]
 
−
** [http://www.uniprot.org/uniprot/P17814 P17814]
 
−
** [http://www.uniprot.org/uniprot/P31687 P31687]
 
−
** [http://www.uniprot.org/uniprot/Q8S5C2 Q8S5C2]
 
−
** [http://www.uniprot.org/uniprot/P14912 P14912]
 
−
** [http://www.uniprot.org/uniprot/P14913 P14913]
 
−
** [http://www.uniprot.org/uniprot/P31686 P31686]
 
−
** [http://www.uniprot.org/uniprot/Q42524 Q42524]
 
−
** [http://www.uniprot.org/uniprot/Q42943 Q42943]
 
−
** [http://www.uniprot.org/uniprot/Q42982 Q42982]
 
−
** [http://www.uniprot.org/uniprot/P93360 P93360]
 
−
** [http://www.uniprot.org/uniprot/P93361 P93361]
 
−
** [http://www.uniprot.org/uniprot/O24146 O24146]
 
−
** [http://www.uniprot.org/uniprot/O48868 O48868]
 
−
** [http://www.uniprot.org/uniprot/O48869 O48869]
 
−
** [http://www.uniprot.org/uniprot/O81139 O81139]
 
−
** [http://www.uniprot.org/uniprot/O81140 O81140]
 
−
** [http://www.uniprot.org/uniprot/P41636 P41636]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-6.2.1.12}}
+
{{#set: common-name=phytol kinase}}
−
{{#set: nb gene associated=2}}
+
{{#set: ec-number=ec-2.7.1.182}}
−
{{#set: nb pathway associated=12}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:29, 27 August 2019

Reaction RXN-7683

  • direction:
    • left-to-right
  • common-name:
    • phytol kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5107, phytol salvage pathway: PWY-5107
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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