Difference between revisions of "CPD-9965"

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(Created page with "Category:gene == Gene SJ17987 == * transcription-direction: ** positive * right-end-position: ** 3216 * left-end-position: ** 819 * centisome-position: ** 24.661245 ==...")
 
(Created page with "Category:metabolite == Metabolite CPD-9965 == * common-name: ** icosanoyl-coa * smiles: ** cccccccccccccccccccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ17987 ==
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== Metabolite CPD-9965 ==
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* transcription-direction:
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* common-name:
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** positive
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** icosanoyl-coa
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* right-end-position:
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* smiles:
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** 3216
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** cccccccccccccccccccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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* left-end-position:
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* inchi-key:
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** 819
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** jylsvnbjlycssw-ibyujnrcsa-j
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* centisome-position:
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* molecular-weight:
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** 24.661245   
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** 1058.022
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-13295]]
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== Reaction(s) associated ==
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* [[RXN-9356]]
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* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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* [[RXN-9629]]
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** Category: [[annotation]]
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* [[RXN1G-460]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) known to produce the compound ==
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* [[BIOTIN-CARBOXYL-RXN]]
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* [[RXN-9356]]
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** Category: [[annotation]]
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* [[RXN1G-460]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[RXN0-5055]]
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{{#set: common-name=icosanoyl-coa}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=jylsvnbjlycssw-ibyujnrcsa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=1058.022}}
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== Pathway(s) associated ==
 
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* [[PWY-7388]]
 
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** '''7''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6679]]
 
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** '''1''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-5744]]
 
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** '''4''' reactions found over '''13''' reactions in the full pathway
 
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* [[PWY-5743]]
 
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** '''5''' reactions found over '''13''' reactions in the full pathway
 
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* [[PWY-5789]]
 
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** '''8''' reactions found over '''18''' reactions in the full pathway
 
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* [[PWY0-1264]]
 
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** '''3''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-6722]]
 
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** '''1''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-4381]]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=3216}}
 
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{{#set: left-end-position=819}}
 
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{{#set: centisome-position=24.661245    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=3}}
 
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{{#set: nb pathway associated=8}}
 

Latest revision as of 11:11, 18 March 2021

Metabolite CPD-9965

  • common-name:
    • icosanoyl-coa
  • smiles:
    • cccccccccccccccccccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • jylsvnbjlycssw-ibyujnrcsa-j
  • molecular-weight:
    • 1058.022

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-9965&oldid=136938"