Difference between revisions of "CPD0-1905"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14386 RXN-14386] == * direction: ** left-to-right * common-name: ** [cysteine desulfurase]-s-su...")
(Created page with "Category:metabolite == Metabolite CPD0-1905 == * common-name: ** 8-oxo-dgtp * smiles: ** c(op(=o)([o-])op(=o)(op([o-])([o-])=o)[o-])c1(oc(cc(o)1)n3(c(=o)nc2(c(=o)nc(n)=nc=...")
 
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[[Category:reaction]]
+
[[Category:metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14386 RXN-14386] ==
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== Metabolite CPD0-1905 ==
* direction:
 
** left-to-right
 
 
* common-name:
 
* common-name:
** [cysteine desulfurase]-s-sulfanylcysteine:[acceptor protein]-cysteine sulfurtransferase
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** 8-oxo-dgtp
* ec-number:
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* smiles:
** [http://enzyme.expasy.org/EC/2.8.1.7 ec-2.8.1.7]
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** c(op(=o)([o-])op(=o)(op([o-])([o-])=o)[o-])c1(oc(cc(o)1)n3(c(=o)nc2(c(=o)nc(n)=nc=23)))
== Reaction formula ==
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* inchi-key:
* 1 [[S-CD-S-SP-Complex]][c] '''=>''' 1 [[CD-2S-SP-Complex]][c]
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** buzogvvqwcxxdp-vpeninkcsa-j
== Gene(s) associated with this reaction  ==
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* molecular-weight:
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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** 519.151
* Gene: [[SJ04060]]
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== Reaction(s) known to consume the compound ==
** Category: [[annotation]]
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* [[RXN-11396]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-14205]]
** Category: [[orthology]]
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== Reaction(s) known to produce the compound ==
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RXN-14205]]
* Gene: [[SJ03223]]
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== Reaction(s) of unknown directionality ==
** Category: [[annotation]]
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{{#set: common-name=8-oxo-dgtp}}
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: inchi-key=inchikey=buzogvvqwcxxdp-vpeninkcsa-j}}
* Gene: [[SJ09474]]
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{{#set: molecular-weight=519.151}}
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ17324]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ13485]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ19133]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
</div>
 
== Pathway(s) ==
 
* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250]
 
** '''5''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=[cysteine desulfurase]-s-sulfanylcysteine:[acceptor protein]-cysteine sulfurtransferase}}
 
{{#set: ec-number=ec-2.8.1.7}}
 
{{#set: nb gene associated=6}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:17, 18 March 2021

Metabolite CPD0-1905

  • common-name:
    • 8-oxo-dgtp
  • smiles:
    • c(op(=o)([o-])op(=o)(op([o-])([o-])=o)[o-])c1(oc(cc(o)1)n3(c(=o)nc2(c(=o)nc(n)=nc=23)))
  • inchi-key:
    • buzogvvqwcxxdp-vpeninkcsa-j
  • molecular-weight:
    • 519.151

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality