Difference between revisions of "CPD0-2121"

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(Created page with "Category:gene == Gene SJ14184 == * transcription-direction: ** positive * right-end-position: ** 18708 * left-end-position: ** 1981 * centisome-position: ** 0.61177474...")
 
(Created page with "Category:metabolite == Metabolite CPD0-2121 == * common-name: ** trans-hex-2-enoyl-coa * smiles: ** cccc=cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=...")
 
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ14184 ==
+
== Metabolite CPD0-2121 ==
* transcription-direction:
+
* common-name:
** positive
+
** trans-hex-2-enoyl-coa
* right-end-position:
+
* smiles:
** 18708
+
** cccc=cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
* left-end-position:
+
* inchi-key:
** 1981
+
** oinxhibnzuuimr-ixuyqxaasa-j
* centisome-position:
+
* molecular-weight:
** 0.61177474   
+
** 859.631
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
+
* [[ECOAH2h]]
== Reaction(s) associated ==
+
* [[RXN-12559]]
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-14278]]
* [[2.4.1.223-RXN]]
+
* [[TRANSENOYLCOARED-RXN-HEXANOYL-COA/NADP//CPD0-2121/NADPH/PROTON.42.]]
** Category: [[annotation]]
+
== Reaction(s) known to produce the compound ==
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[ECOAH2h]]
* [[2.4.1.224-RXN]]
+
* [[RXN-12567]]
** Category: [[annotation]]
+
* [[RXN-14278]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
== Reaction(s) of unknown directionality ==
* [[2.4.1.225-RXN]]
+
{{#set: common-name=trans-hex-2-enoyl-coa}}
** Category: [[annotation]]
+
{{#set: inchi-key=inchikey=oinxhibnzuuimr-ixuyqxaasa-j}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: molecular-weight=859.631}}
* [[RXN-10606]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10607]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10608]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10609]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10616]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10617]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10618]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10619]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10784]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-11060]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-13607]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-13608]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-14361]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-9000]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN66-162]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN66-168]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN66-83]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[UDP-GLUCURONOSYLTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
== Pathway(s) associated ==
 
* [[PWY-6558]]
 
** '''7''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-6261]]
 
** '''10''' reactions found over '''15''' reactions in the full pathway
 
* [[PWY-6313]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-6398]]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-5756]]
 
** '''1''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY66-221]]
 
** '''5''' reactions found over '''18''' reactions in the full pathway
 
* [[PWY66-201]]
 
** '''3''' reactions found over '''16''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=18708}}
 
{{#set: left-end-position=1981}}
 
{{#set: centisome-position=0.61177474    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=21}}
 
{{#set: nb pathway associated=7}}
 

Latest revision as of 11:13, 18 March 2021

Metabolite CPD0-2121

  • common-name:
    • trans-hex-2-enoyl-coa
  • smiles:
    • cccc=cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • oinxhibnzuuimr-ixuyqxaasa-j
  • molecular-weight:
    • 859.631

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality