Difference between revisions of "CPD0-2171"

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(Created page with "Category:gene == Gene SJ21863 == * transcription-direction: ** positive * right-end-position: ** 102674 * left-end-position: ** 97880 * centisome-position: ** 52.936436...")
(Created page with "Category:metabolite == Metabolite CPD0-2171 == * common-name: ** (s)-3-hydroxytetradecanoyl-coa * smiles: ** cccccccccccc(o)cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op(...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ21863 ==
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== Metabolite CPD0-2171 ==
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* transcription-direction:
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* common-name:
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** positive
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** (s)-3-hydroxytetradecanoyl-coa
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* right-end-position:
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* smiles:
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** 102674
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** cccccccccccc(o)cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
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* left-end-position:
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* inchi-key:
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** 97880
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** oxbhkmhndgrdcz-stlsenowsa-j
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* centisome-position:
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* molecular-weight:
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** 52.936436   
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** 989.861
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[ECOAH6h]]
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== Reaction(s) associated ==
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* [[HACD6h]]
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* [[ARACHIDONATE-15-LIPOXYGENASE-RXN]]
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* [[RXN-12507]]
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** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[ECOAH6h]]
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* [[RXN-1321]]
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* [[HACD6h]]
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** Category: [[orthology]]
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* [[RXN-14273]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[RXN-8497]]
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{{#set: common-name=(s)-3-hydroxytetradecanoyl-coa}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=oxbhkmhndgrdcz-stlsenowsa-j}}
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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{{#set: molecular-weight=989.861}}
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== Pathway(s) associated ==
 
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* [[PWY-5410]]
 
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** '''2''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-735]]
 
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** '''16''' reactions found over '''19''' reactions in the full pathway
 
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* [[PWY-6917]]
 
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** '''2''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-5406]]
 
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** '''1''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-5407]]
 
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** '''1''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-5408]]
 
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** '''1''' reactions found over '''4''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=102674}}
 
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{{#set: left-end-position=97880}}
 
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{{#set: centisome-position=52.936436    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=3}}
 
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{{#set: nb pathway associated=6}}
 

Latest revision as of 11:12, 18 March 2021

Metabolite CPD0-2171

  • common-name:
    • (s)-3-hydroxytetradecanoyl-coa
  • smiles:
    • cccccccccccc(o)cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
  • inchi-key:
    • oxbhkmhndgrdcz-stlsenowsa-j
  • molecular-weight:
    • 989.861

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD0-2171&oldid=137055"