Difference between revisions of "CPD0-2338"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.34-RXN 2.1.1.34-RXN] == * direction: ** left-to-right * common-name: ** trna (gm18) 2'-o-meth...")
 
(Created page with "Category:gene == Gene SJ00073 == * transcription-direction: ** positive * right-end-position: ** 1220170 * left-end-position: ** 1217501 * centisome-position: ** 82.87647...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.34-RXN 2.1.1.34-RXN] ==
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== Gene SJ00073 ==
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* direction:
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* transcription-direction:
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** left-to-right
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** positive
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* common-name:
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* right-end-position:
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** trna (gm18) 2'-o-methyltransferase
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** 1220170
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** trna (guanosine-2'-o-)-methyltransferase
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* left-end-position:
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* ec-number:
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** 1217501
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** [http://enzyme.expasy.org/EC/2.1.1.34 ec-2.1.1.34]
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* centisome-position:
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== Reaction formula ==
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** 82.87647   
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* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[tRNA-guanosine18]][c] '''=>''' 1 [[2-O-Methylguanosine18]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
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== Organism(s) associated with this gene  ==
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== Gene(s) associated with this reaction  ==
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* [[S.japonica_carotenoid_curated]]
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* Gene: [[SJ15492]]
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== Reaction(s) associated ==
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* [[PROTEIN-KINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[SJ01024]]
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{{#set: transcription-direction=positive}}
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** Category: [[annotation]]
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{{#set: right-end-position=1220170}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: left-end-position=1217501}}
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* Gene: [[SJ04726]]
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{{#set: centisome-position=82.87647    }}
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** Category: [[annotation]]
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb reaction associated=1}}
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== Pathway(s)  ==
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20078 20078]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R02917 R02917]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q9CEG9 Q9CEG9]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=trna (gm18) 2'-o-methyltransferase|trna (guanosine-2'-o-)-methyltransferase}}
 
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{{#set: ec-number=ec-2.1.1.34}}
 
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{{#set: nb gene associated=3}}
 
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{{#set: nb pathway associated=0}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 14:24, 26 August 2019

Gene SJ00073

  • transcription-direction:
    • positive
  • right-end-position:
    • 1220170
  • left-end-position:
    • 1217501
  • centisome-position:
    • 82.87647

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD0-2338&oldid=21185"