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| Line 1: |
Line 1: |
| − | [[Category:gene]] | + | [[Category:reaction]] |
| − | == Gene SJ21294 ==
| + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTATHIONASE-RXN CYSTATHIONASE-RXN] == |
| − | * transcription-direction:
| + | * direction: |
| − | ** positive
| + | ** reversible |
| − | * right-end-position:
| + | == Reaction formula == |
| − | ** 170545
| + | * 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[CYS]][c] '''+''' 1 [[HOMO-SER]][c] |
| − | * left-end-position:
| + | == Gene(s) associated with this reaction == |
| − | ** 137602
| + | == Pathway(s) == |
| − | * centisome-position:
| + | == Reconstruction information == |
| − | ** 70.67531
| + | * category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling |
| − | == Organism(s) associated with this gene ==
| + | == External links == |
| − | * [[S.japonica_carotenoid_curated]]
| + | {{#set: direction=reversible}} |
| − | == Reaction(s) associated == | + | {{#set: nb gene associated=0}} |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | {{#set: nb pathway associated=0}} |
| − | * [[D-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN]]
| + | {{#set: reconstruction category=gap-filling}} |
| − | ** Category: [[annotation]]
| + | {{#set: reconstruction tool=meneco}} |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| + | {{#set: reconstruction comment=added for gapfilling}} |
| − | * [[DLACTDEHYDROGNAD-RXN]]
| + | {{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}} |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[GLYCOLATEDEHYDRO-RXN]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RR-BUTANEDIOL-DEHYDROGENASE-RXN]]
| |
| − | ** Category: [[orthology]] | |
| − | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
| |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
| − | * [[RXN-969]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN0-7229]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[S-2-HYDROXY-ACID-OXIDASE-RXN]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | </div>
| |
| − | == Pathway(s) associated == | |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * [[MGLDLCTANA-PWY]] | |
| − | ** '''2''' reactions found over '''4''' reactions in the full pathway
| |
| − | * [[P122-PWY]]
| |
| − | ** '''16''' reactions found over '''18''' reactions in the full pathway
| |
| − | * [[FERMENTATION-PWY]]
| |
| − | ** '''11''' reactions found over '''16''' reactions in the full pathway
| |
| − | * [[PWY4LZ-257]]
| |
| − | ** '''7''' reactions found over '''7''' reactions in the full pathway
| |
| − | * [[PWY-6454]]
| |
| − | ** '''1''' reactions found over '''3''' reactions in the full pathway
| |
| − | * [[PWY-6901]]
| |
| − | ** '''10''' reactions found over '''8''' reactions in the full pathway
| |
| − | * [[ALACAT2-PWY]]
| |
| − | ** '''3''' reactions found over '''3''' reactions in the full pathway
| |
| − | * [[PWY-6649]]
| |
| − | ** '''1''' reactions found over '''3''' reactions in the full pathway
| |
| − | * [[GLYOXDEG-PWY]]
| |
| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
| |
| − | * [[GLYCOLATEMET-PWY]]
| |
| − | ** '''2''' reactions found over '''4''' reactions in the full pathway
| |
| − | * [[PWY-5951]]
| |
| − | ** '''1''' reactions found over '''1''' reactions in the full pathway
| |
| − | * [[PWY3O-246]]
| |
| − | ** '''1''' reactions found over '''1''' reactions in the full pathway
| |
| − | * [[PWY-181]]
| |
| − | ** '''5''' reactions found over '''9''' reactions in the full pathway
| |
| − | * [[PWY-6387]]
| |
| − | ** '''2''' reactions found over '''8''' reactions in the full pathway
| |
| − | * [[PWY-7953]] | |
| − | ** '''2''' reactions found over '''8''' reactions in the full pathway
| |
| − | * [[PWY-6386]]
| |
| − | ** '''2''' reactions found over '''8''' reactions in the full pathway
| |
| − | * [[PWY0-1261]]
| |
| − | ** '''3''' reactions found over '''12''' reactions in the full pathway
| |
| − | </div>
| |
| − | {{#set: transcription-direction=positive}} | |
| − | {{#set: right-end-position=170545}} | |
| − | {{#set: left-end-position=137602}} | |
| − | {{#set: centisome-position=70.67531 }} | |
| − | {{#set: organism associated=S.japonica_carotenoid_curated}} | |
| − | {{#set: nb reaction associated=8}} | |
| − | {{#set: nb pathway associated=17}} | |
