Difference between revisions of "CPD1F-135"

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(Created page with "Category:gene == Gene SJ05740 == * transcription-direction: ** negative * right-end-position: ** 98573 * left-end-position: ** 95200 * centisome-position: ** 19.451397...")
(Created page with "Category:metabolite == Metabolite CPD1F-135 == * common-name: ** trans-neoxanthin * smiles: ** cc(c=cc=c(c)[ch]=c=c1(c(o)(c)cc(o)cc(c)(c)1))=cc=cc=c(c)c=cc=c(c)c=cc23(c(c)...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ05740 ==
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== Metabolite CPD1F-135 ==
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* transcription-direction:
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* common-name:
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** negative
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** trans-neoxanthin
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* right-end-position:
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* smiles:
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** 98573
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** cc(c=cc=c(c)[ch]=c=c1(c(o)(c)cc(o)cc(c)(c)1))=cc=cc=c(c)c=cc=c(c)c=cc23(c(c)(c)cc(o)cc(c)(o2)3)
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* left-end-position:
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* inchi-key:
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** 95200
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** pgyaysrvsajxte-clonmanbsa-n
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* centisome-position:
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* molecular-weight:
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** 19.451397   
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** 600.88
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-8074]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN1F-155]]
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* [[3.2.1.21-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=trans-neoxanthin}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=pgyaysrvsajxte-clonmanbsa-n}}
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* [[3.2.1.58-RXN]]
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{{#set: molecular-weight=600.88}}
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[3.2.1.75-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-10769]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-10773]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-13602]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-13603]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-14179]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-5341]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-8036]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-9674]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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</div>
 
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== Pathway(s) associated ==
 
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* [[PWY-6788]]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-7091]]
 
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** '''2''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-7092]]
 
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** '''2''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-3121]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-5176]]
 
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** '''1''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-6002]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=98573}}
 
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{{#set: left-end-position=95200}}
 
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{{#set: centisome-position=19.451397    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=11}}
 
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{{#set: nb pathway associated=6}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite CPD1F-135

  • common-name:
    • trans-neoxanthin
  • smiles:
    • cc(c=cc=c(c)[ch]=c=c1(c(o)(c)cc(o)cc(c)(c)1))=cc=cc=c(c)c=cc=c(c)c=cc23(c(c)(c)cc(o)cc(c)(o2)3)
  • inchi-key:
    • pgyaysrvsajxte-clonmanbsa-n
  • molecular-weight:
    • 600.88

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD1F-135&oldid=138495"