Difference between revisions of "CPD1F-2"

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(Created page with "Category:gene == Gene SJ19194 == * transcription-direction: ** positive * right-end-position: ** 78523 * left-end-position: ** 44730 * centisome-position: ** 19.375715...")
(Created page with "Category:metabolite == Metabolite CPD-206 == * common-name: ** phytanoyl-coa * smiles: ** cc(c)cccc(c)cccc(c)cccc(c)cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op...")
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ19194 ==
+
== Metabolite CPD-206 ==
* transcription-direction:
+
* common-name:
** positive
+
** phytanoyl-coa
* right-end-position:
+
* smiles:
** 78523
+
** cc(c)cccc(c)cccc(c)cccc(c)cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o
* left-end-position:
+
* inchi-key:
** 44730
+
** nrjqghhzmsouen-hhvnvsiesa-j
* centisome-position:
+
* molecular-weight:
** 19.375715   
+
** 1058.022
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
+
* [[1.14.11.18-RXN]]
== Reaction(s) associated ==
+
== Reaction(s) known to produce the compound ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN66-482]]
* [[ARYL-SULFOTRANSFERASE-RXN]]
+
== Reaction(s) of unknown directionality ==
** Category: [[annotation]]
+
{{#set: common-name=phytanoyl-coa}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: inchi-key=inchikey=nrjqghhzmsouen-hhvnvsiesa-j}}
* [[RXN-10614]]
+
{{#set: molecular-weight=1058.022}}
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10615]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10777]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10782]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-11058]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-11059]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15587]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15588]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15589]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN6666-9]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
== Pathway(s) associated ==
 
* [[PWY-6261]]
 
** '''10''' reactions found over '''15''' reactions in the full pathway
 
* [[PWY-6313]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-6398]]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY6666-2]]
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=78523}}
 
{{#set: left-end-position=44730}}
 
{{#set: centisome-position=19.375715    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=11}}
 
{{#set: nb pathway associated=4}}
 

Revision as of 20:33, 18 December 2020

Metabolite CPD-206

  • common-name:
    • phytanoyl-coa
  • smiles:
    • cc(c)cccc(c)cccc(c)cccc(c)cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o
  • inchi-key:
    • nrjqghhzmsouen-hhvnvsiesa-j
  • molecular-weight:
    • 1058.022

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality