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| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN] == | + | == Metabolite CPD1F-97 == |
| − | * direction:
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| − | ** reversible
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| | * common-name: | | * common-name: |
| − | ** hydroxymethyl glutaryl-coa synthase | + | ** gibberellin a15 (open lactone form) |
| − | * ec-number: | + | * smiles: |
| − | ** [http://enzyme.expasy.org/EC/2.3.3.10 ec-2.3.3.10] | + | ** c=c1(c2(cc3(c1)(c([ch]4(c(c)(cccc(co)([ch](cc2)3)4)c([o-])=o))c([o-])=o))) |
| − | == Reaction formula == | + | * inchi-key: |
| − | * 1 [[ACETOACETYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c]
| + | ** tzgxvfytktwkcu-cxxojbqzsa-l |
| − | == Gene(s) associated with this reaction == | + | * molecular-weight: |
| − | * Gene: [[SJ06617]] | + | ** 346.422 |
| − | ** Category: [[annotation]] | + | == Reaction(s) known to consume the compound == |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| + | * [[RXN1F-163]] |
| − | ** Category: [[orthology]] | + | == Reaction(s) known to produce the compound == |
| − | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | * [[RXN1F-162]] |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | == Reaction(s) of unknown directionality == |
| − | * Gene: [[SJ11593]]
| + | {{#set: common-name=gibberellin a15 (open lactone form)}} |
| − | ** Category: [[annotation]]
| + | {{#set: inchi-key=inchikey=tzgxvfytktwkcu-cxxojbqzsa-l}} |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| + | {{#set: molecular-weight=346.422}} |
| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | |
| − | == Pathway(s) == | |
| − | * [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391] | |
| − | ** '''7''' reactions found over '''8''' reactions in the full pathway
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| − | * [[PWY-7524]], mevalonate pathway III (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524]
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| − | ** '''5''' reactions found over '''8''' reactions in the full pathway
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| − | * [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
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| − | ** '''7''' reactions found over '''7''' reactions in the full pathway
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| − | * [[PWY-6174]], mevalonate pathway II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174]
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| − | ** '''6''' reactions found over '''7''' reactions in the full pathway
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| − | * [[PWY66-367]], ketogenesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-367 PWY66-367]
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| − | ** '''4''' reactions found over '''5''' reactions in the full pathway
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| − | * [[PWY-7571]], ferrichrome A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7571 PWY-7571] | |
| − | ** '''1''' reactions found over '''5''' reactions in the full pathway
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| − | == Reconstruction information == | |
| − | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | == External links ==
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| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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| − | * RHEA:
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| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10191 10191]
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| − | * LIGAND-RXN:
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| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01978 R01978]
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| − | * UNIPROT:
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| − | ** [http://www.uniprot.org/uniprot/P13704 P13704]
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| − | ** [http://www.uniprot.org/uniprot/P22791 P22791]
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| − | ** [http://www.uniprot.org/uniprot/P54870 P54870]
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| − | ** [http://www.uniprot.org/uniprot/P54869 P54869]
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| − | ** [http://www.uniprot.org/uniprot/O51626 O51626]
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| − | ** [http://www.uniprot.org/uniprot/Q9CFA9 Q9CFA9]
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| − | ** [http://www.uniprot.org/uniprot/P17425 P17425]
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| − | ** [http://www.uniprot.org/uniprot/Q7LZE7 Q7LZE7]
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| − | ** [http://www.uniprot.org/uniprot/Q01581 Q01581]
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| − | ** [http://www.uniprot.org/uniprot/P54961 P54961]
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| − | ** [http://www.uniprot.org/uniprot/P54839 P54839]
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| − | ** [http://www.uniprot.org/uniprot/P54874 P54874]
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| − | ** [http://www.uniprot.org/uniprot/P54868 P54868]
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| − | ** [http://www.uniprot.org/uniprot/P54873 P54873]
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| − | ** [http://www.uniprot.org/uniprot/P93773 P93773]
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| − | </div>
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| − | {{#set: direction=reversible}}
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| − | {{#set: common-name=hydroxymethyl glutaryl-coa synthase}} | |
| − | {{#set: ec-number=ec-2.3.3.10}} | |
| − | {{#set: nb gene associated=2}} | |
| − | {{#set: nb pathway associated=6}}
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| − | {{#set: reconstruction category=orthology|annotation}}
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| − | {{#set: reconstruction tool=pathwaytools|pantograph}}
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| − | {{#set: reconstruction comment=n.a}}
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| − | {{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
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