Difference between revisions of "CPD1G-332"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SELENOCYSTEINE-LYASE-RXN SELENOCYSTEINE-LYASE-RXN] == * direction: ** left-to-right * common-name:...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCEROL-DEHYDRATASE-RXN GLYCEROL-DEHYDRATASE-RXN] == * direction: ** left-to-right * ec-number: **...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SELENOCYSTEINE-LYASE-RXN SELENOCYSTEINE-LYASE-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCEROL-DEHYDRATASE-RXN GLYCEROL-DEHYDRATASE-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** selenocysteine lyase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.4.1.16 ec-4.4.1.16]
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** [http://enzyme.expasy.org/EC/4.2.1.30 ec-4.2.1.30]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Donor-H2]][c] '''+''' 1 [[L-SELENOCYSTEINE]][c] '''=>''' 1 [[Acceptor]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SE-2]][c]
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* 1 [[GLYCEROL]][c] '''=>''' 1 [[HYDROXYPROPANAL]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ17324]]
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* Gene: [[SJ15896]]
** Category: [[annotation]]
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** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ13485]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ19133]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ03223]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6130]], glycerol degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6130 PWY-6130]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19766 19766]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R03599 R03599]
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** [http://www.genome.jp/dbget-bin/www_bget?R01047 R01047]
** [http://www.genome.jp/dbget-bin/www_bget?R03598 R03598]
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11632 11632]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=selenocysteine lyase}}
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{{#set: ec-number=ec-4.2.1.30}}
{{#set: ec-number=ec-4.4.1.16}}
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{{#set: nb gene associated=1}}
{{#set: nb gene associated=4}}
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{{#set: nb pathway associated=2}}
{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 09:29, 27 August 2019

Reaction GLYCEROL-DEHYDRATASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7385, 1,3-propanediol biosynthesis (engineered): PWY-7385
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-6130, glycerol degradation III: PWY-6130
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links