Difference between revisions of "CPD1G-772"

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(Created page with "Category:gene == Gene SJ13884 == * transcription-direction: ** positive * right-end-position: ** 191335 * left-end-position: ** 172621 * centisome-position: ** 52.38336...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IDI IDI] == * direction: ** left-to-right * common-name: ** isopentenyl-diphosphate delta-isomerase...")
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[[Category:gene]]
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[[Category:reaction]]
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== Gene SJ13884 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IDI IDI] ==
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* transcription-direction:
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* direction:
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** positive
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** left-to-right
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* right-end-position:
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* common-name:
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** 191335
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** isopentenyl-diphosphate delta-isomerase
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* left-end-position:
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== Reaction formula ==
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** 172621
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* 1.0 [[DELTA3-ISOPENTENYL-PP]][c] '''=>''' 1.0 [[CPD-4211]][c]
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* centisome-position:
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== Gene(s) associated with this reaction  ==
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** 52.38336   
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* Gene: [[SJ02782]]
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== Organism(s) associated with this gene  ==
 
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* [[S.japonica_carotenoid_curated]]
 
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== Reaction(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[3.6.4.5-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[ATPASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* Gene: [[SJ15203]]
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RXN-12195]]
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== Pathway(s)  ==
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** Category: [[annotation]]
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== Reconstruction information  ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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** Category: [[orthology]]
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== External links  ==
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: direction=left-to-right}}
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* [[RXN-12196]]
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{{#set: common-name=isopentenyl-diphosphate delta-isomerase}}
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** Category: [[annotation]]
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{{#set: nb gene associated=2}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: nb pathway associated=0}}
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** Category: [[orthology]]
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{{#set: reconstruction category=orthology}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: reconstruction tool=pantograph}}
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* [[RXN0-5462]]
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{{#set: reconstruction comment=n.a}}
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** Category: [[annotation]]
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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</div>
 
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== Pathway(s) associated ==
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=191335}}
 
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{{#set: left-end-position=172621}}
 
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{{#set: centisome-position=52.38336    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=6}}
 
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{{#set: nb pathway associated=4}}
 

Revision as of 09:28, 27 August 2019

Reaction IDI

  • direction:
    • left-to-right
  • common-name:
    • isopentenyl-diphosphate delta-isomerase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD1G-772&oldid=34241"