Difference between revisions of "CPD66-21"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.2-RXN 1.3.7.2-RXN] == * direction: ** left-to-right * common-name: ** 15,16-dihydrobiliverdin...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=7KAPSYN-RXN 7KAPSYN-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.2-RXN 1.3.7.2-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=7KAPSYN-RXN 7KAPSYN-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 15,16-dihydrobiliverdin:ferredoxin oxidoreductase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.7.2 ec-1.3.7.2]
+
** [http://enzyme.expasy.org/EC/2.3.1.47 ec-2.3.1.47]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[BILIVERDINE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[1516-DIHYDROBILIVERDIN]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
+
* 1 [[CPD-558]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[8-AMINO-7-OXONONANOATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03344]]
+
* Gene: [[SJ00855]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ04340]]
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5915]], phycoerythrobilin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915]
+
* [[PWY-6578]], 8-amino-7-oxononanoate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6578 PWY-6578]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7579]], phycourobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10170 10170]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20712 20712]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05818 R05818]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03210 R03210]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q58694 Q58694]
 +
** [http://www.uniprot.org/uniprot/O84782 O84782]
 +
** [http://www.uniprot.org/uniprot/Q9Z6Y3 Q9Z6Y3]
 +
** [http://www.uniprot.org/uniprot/P0A4X4 P0A4X4]
 +
** [http://www.uniprot.org/uniprot/Q9K0U0 Q9K0U0]
 +
** [http://www.uniprot.org/uniprot/Q9PLE6 Q9PLE6]
 +
** [http://www.uniprot.org/uniprot/P44422 P44422]
 +
** [http://www.uniprot.org/uniprot/O25320 O25320]
 +
** [http://www.uniprot.org/uniprot/P53556 P53556]
 +
** [http://www.uniprot.org/uniprot/Q9PIJ3 Q9PIJ3]
 +
** [http://www.uniprot.org/uniprot/O66875 O66875]
 +
** [http://www.uniprot.org/uniprot/Q9ZLN3 Q9ZLN3]
 +
** [http://www.uniprot.org/uniprot/Q9Z6L6 Q9Z6L6]
 +
** [http://www.uniprot.org/uniprot/Q9JT28 Q9JT28]
 +
** [http://www.uniprot.org/uniprot/P22806 P22806]
 +
** [http://www.uniprot.org/uniprot/P45487 P45487]
 +
** [http://www.uniprot.org/uniprot/P74770 P74770]
 +
** [http://www.uniprot.org/uniprot/P12998 P12998]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=15,16-dihydrobiliverdin:ferredoxin oxidoreductase}}
+
{{#set: ec-number=ec-2.3.1.47}}
−
{{#set: ec-number=ec-1.3.7.2}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}

Revision as of 09:29, 27 August 2019

Reaction 7KAPSYN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6578, 8-amino-7-oxononanoate biosynthesis III: PWY-6578
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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