Difference between revisions of "CPD66-34"
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(Created page with "Category:gene == Gene SJ04839 == * transcription-direction: ** negative * right-end-position: ** 287696 * left-end-position: ** 280508 * centisome-position: ** 55.518105...") |
(Created page with "Category:gene == Gene SJ17935 == * transcription-direction: ** negative * right-end-position: ** 73269 * left-end-position: ** 63525 * centisome-position: ** 25.018707...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ17935 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 73269 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 63525 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 25.018707 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[GALACTOKIN-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | * [[UDPGLUCEPIM-RXN]] |
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-6527]] | ||
| + | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-6317]] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY66-422]] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-3821]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-7344]] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | * [[COLANSYN-PWY]] | ||
| + | ** '''6''' reactions found over '''1''' reactions in the full pathway | ||
| + | * [[PWY-6397]] | ||
| + | ** '''1''' reactions found over '''17''' reactions in the full pathway | ||
| + | * [[PWY-7328]] | ||
| + | ** '''5''' reactions found over '''2''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=73269}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=63525}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=25.018707 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=2}} | {{#set: nb reaction associated=2}} | ||
| + | {{#set: nb pathway associated=8}} | ||
Revision as of 14:23, 26 August 2019
Contents
Gene SJ17935
- transcription-direction:
- negative
- right-end-position:
- 73269
- left-end-position:
- 63525
- centisome-position:
- 25.018707
Organism(s) associated with this gene
Reaction(s) associated
- GALACTOKIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- UDPGLUCEPIM-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-6527
- 7 reactions found over 7 reactions in the full pathway
- PWY-6317
- 5 reactions found over 5 reactions in the full pathway
- PWY66-422
- 5 reactions found over 5 reactions in the full pathway
- PWY-3821
- 3 reactions found over 3 reactions in the full pathway
- PWY-7344
- 1 reactions found over 1 reactions in the full pathway
- COLANSYN-PWY
- 6 reactions found over 1 reactions in the full pathway
- PWY-6397
- 1 reactions found over 17 reactions in the full pathway
- PWY-7328
- 5 reactions found over 2 reactions in the full pathway
