Difference between revisions of "CREATINASE-RXN"

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(Created page with "Category:reaction == Reaction GLU6PDEHYDROG-RXN == * direction: ** left-to-right * common-name: ** glucose-6-phosphate dehydrogenase (nadp+) * ec-number: ** [http://enzyme...")
(Created page with "Category:reaction == Reaction RXN-9531 == * direction: ** left-to-right * common-name: ** 3-oxo-dodecanoyl-[acyl-carrier protein] synthase ** 3-oxoacyl-[acyl-carrier-prote...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLU6PDEHYDROG-RXN ==
+
== Reaction RXN-9531 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** glucose-6-phosphate dehydrogenase (nadp+)
+
** 3-oxo-dodecanoyl-[acyl-carrier protein] synthase
 +
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.49 ec-1.1.1.49]
+
** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-glucopyranose-6-phosphate]][c] '''+''' 1 [[NADP]][c] '''=>''' 1 [[D-6-P-GLUCONO-DELTA-LACTONE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[Decanoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-dodecanoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11913]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ15984]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06617]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ18059]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04443]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ00005]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ15983]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ10624]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7268]], NAD/NADP-NADH/NADPH cytosolic interconversion (yeast):
+
* [[PWY-5971]], palmitate biosynthesis (type II fatty acid synthase):
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''31''' reactions found over '''31''' reactions in the full pathway
−
* [[P122-PWY]], heterolactic fermentation:
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[GLYCOLYSIS-E-D]], superpathway of glycolysis and the Entner-Doudoroff pathway:
 
−
** '''4''' reactions found over '''2''' reactions in the full pathway
 
−
* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[RUMP-PWY]], formaldehyde oxidation I:
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15842 15842]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02736 R02736]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04963 R04963]
−
* UNIPROT:
+
* METANETX-RXN : MNXR109254
−
** [http://www.uniprot.org/uniprot/P11411 P11411]
 
−
** [http://www.uniprot.org/uniprot/P12646 P12646]
 
−
** [http://www.uniprot.org/uniprot/Q00612 Q00612]
 
−
** [http://www.uniprot.org/uniprot/P54996 P54996]
 
−
** [http://www.uniprot.org/uniprot/P21907 P21907]
 
−
** [http://www.uniprot.org/uniprot/P54547 P54547]
 
−
** [http://www.uniprot.org/uniprot/O51581 O51581]
 
−
** [http://www.uniprot.org/uniprot/P0AC53 P0AC53]
 
−
** [http://www.uniprot.org/uniprot/P11413 P11413]
 
−
** [http://www.uniprot.org/uniprot/P29686 P29686]
 
−
** [http://www.uniprot.org/uniprot/P44311 P44311]
 
−
** [http://www.uniprot.org/uniprot/P56110 P56110]
 
−
** [http://www.uniprot.org/uniprot/Q9JTW0 Q9JTW0]
 
−
** [http://www.uniprot.org/uniprot/O25730 O25730]
 
−
** [http://www.uniprot.org/uniprot/O51240 O51240]
 
−
** [http://www.uniprot.org/uniprot/O66787 O66787]
 
−
** [http://www.uniprot.org/uniprot/P05370 P05370]
 
−
** [http://www.uniprot.org/uniprot/P11410 P11410]
 
−
** [http://www.uniprot.org/uniprot/P11412 P11412]
 
−
** [http://www.uniprot.org/uniprot/Q9R5T2 Q9R5T2]
 
−
** [http://www.uniprot.org/uniprot/P48828 P48828]
 
−
** [http://www.uniprot.org/uniprot/P37986 P37986]
 
−
** [http://www.uniprot.org/uniprot/Q8IKU0 Q8IKU0]
 
−
** [http://www.uniprot.org/uniprot/Q27741 Q27741]
 
−
** [http://www.uniprot.org/uniprot/P48826 P48826]
 
−
** [http://www.uniprot.org/uniprot/Q42919 Q42919]
 
−
** [http://www.uniprot.org/uniprot/P37830 P37830]
 
−
** [http://www.uniprot.org/uniprot/Q9FY99 Q9FY99]
 
−
** [http://www.uniprot.org/uniprot/Q49700 Q49700]
 
−
** [http://www.uniprot.org/uniprot/P73411 P73411]
 
−
** [http://www.uniprot.org/uniprot/Q8L743 Q8L743]
 
−
** [http://www.uniprot.org/uniprot/Q43793 Q43793]
 
−
** [http://www.uniprot.org/uniprot/O65856 O65856]
 
−
** [http://www.uniprot.org/uniprot/Q43839 Q43839]
 
−
** [http://www.uniprot.org/uniprot/O81978 O81978]
 
−
** [http://www.uniprot.org/uniprot/O24357 O24357]
 
−
** [http://www.uniprot.org/uniprot/O24358 O24358]
 
−
** [http://www.uniprot.org/uniprot/O24359 O24359]
 
−
** [http://www.uniprot.org/uniprot/O22404 O22404]
 
−
** [http://www.uniprot.org/uniprot/O22405 O22405]
 
−
** [http://www.uniprot.org/uniprot/O22406 O22406]
 
−
** [http://www.uniprot.org/uniprot/Q9FJI5 Q9FJI5]
 
−
** [http://www.uniprot.org/uniprot/Q9LK23 Q9LK23]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glucose-6-phosphate dehydrogenase (nadp+)}}
+
{{#set: common-name=3-oxo-dodecanoyl-[acyl-carrier protein] synthase|3-oxoacyl-[acyl-carrier-protein] synthase}}
−
{{#set: ec-number=ec-1.1.1.49}}
+
{{#set: ec-number=ec-2.3.1.41|ec-2.3.1.179}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=7}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:40, 15 March 2021

Reaction RXN-9531

  • direction:
    • left-to-right
  • common-name:
    • 3-oxo-dodecanoyl-[acyl-carrier protein] synthase
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5971, palmitate biosynthesis (type II fatty acid synthase):
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR109254
  • Property "Common-name" (as page type) with input value "3-oxo-dodecanoyl-[acyl-carrier protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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