Difference between revisions of "CYSTATHIONASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-3701 == * direction: ** reversible * common-name: ** geranylgeranyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.60 ec-2...")
(Created page with "Category:reaction == Reaction CYSTATHIONASE-RXN == * direction: ** reversible == Reaction formula == * 1 L-CYSTATHIONINE[c] '''+''' 1 WATER[c] '''<=>''' 1 CYS[...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-3701 ==
+
== Reaction CYSTATHIONASE-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
−
* common-name:
 
−
** geranylgeranyltransferase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.5.1.60 ec-2.5.1.60]
 
−
** [http://enzyme.expasy.org/EC/2.5.1.59 ec-2.5.1.59]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GERANYLGERANYL-PP]][c] '''+''' 1 [[PROT-CYS]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[S-GERANYLGERANYL-PROTEIN]][c]
+
* 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[CYS]][c] '''+''' 1 [[HOMO-SER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04802]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ18424]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ06255]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ00009]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR121682
+
* METANETX-RXN : MNXR115794
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=geranylgeranyltransferase}}
+
{{#set: nb gene associated=0}}
−
{{#set: ec-number=ec-2.5.1.60|ec-2.5.1.59}}
 
−
{{#set: nb gene associated=4}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Latest revision as of 11:19, 18 March 2021

Reaction CYSTATHIONASE-RXN

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR115794




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