Difference between revisions of "CYSTATHIONINE-BETA-SYNTHASE-RXN"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed-Light ExchangeSeed-Light] == * direction: ** reversible == Reaction formula == * 1.0 [...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-ACETYLTRANSFER-RXN ACETYL-COA-ACETYLTRANSFER-RXN] == * direction: ** reversible * common...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-ACETYLTRANSFER-RXN ACETYL-COA-ACETYLTRANSFER-RXN] == |
* direction: | * direction: | ||
** reversible | ** reversible | ||
+ | * common-name: | ||
+ | ** acetyl-coa acetyltransferase | ||
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.3.1.9 ec-2.3.1.9] | ||
== Reaction formula == | == Reaction formula == | ||
− | * | + | * 2 [[ACETYL-COA]][c] '''<=>''' 1 [[ACETOACETYL-COA]][c] '''+''' 1 [[CO-A]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | * Gene: [[SJ09371]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ14898]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ21818]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * [[PWY-6174]], mevalonate pathway II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174] | ||
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6883]], pyruvate fermentation to butanol II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6883 PWY-6883] | ||
+ | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-6876]], isopropanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6876 PWY-6876] | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[ACETOACETATE-DEG-PWY]], acetoacetate degradation (to acetyl CoA): [http://metacyc.org/META/NEW-IMAGE?object=ACETOACETATE-DEG-PWY ACETOACETATE-DEG-PWY] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-5177]], glutaryl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5177 PWY-5177] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6588]], pyruvate fermentation to acetone: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6588 PWY-6588] | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922] | ||
+ | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6583]], pyruvate fermentation to butanol I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6583 PWY-6583] | ||
+ | ** '''6''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789] | ||
+ | ** '''8''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY1-3]], polyhydroxybutanoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1-3 PWY1-3] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-7216]], (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7216 PWY-7216] | ||
+ | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7401 PWY-7401] | ||
+ | ** '''6''' reactions found over '''15''' reactions in the full pathway | ||
+ | * [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391] | ||
+ | ** '''7''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate): [http://metacyc.org/META/NEW-IMAGE?object=P162-PWY P162-PWY] | ||
+ | ** '''7''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-5741]], ethylmalonyl-CoA pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5741 PWY-5741] | ||
+ | ** '''2''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863] | ||
+ | ** '''9''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[P163-PWY]], L-lysine fermentation to acetate and butanoate: [http://metacyc.org/META/NEW-IMAGE?object=P163-PWY P163-PWY] | ||
+ | ** '''3''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-7779]], methyl tert-butyl ether degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7779 PWY-7779] | ||
+ | ** '''2''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-7778]], 2-methylpropene degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7778 PWY-7778] | ||
+ | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-7524]], mevalonate pathway III (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524] | ||
+ | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY66-368]], ketolysis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-368 PWY66-368] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY66-367]], ketogenesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-367 PWY66-367] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-5676]], acetyl-CoA fermentation to butanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5676 PWY-5676] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[CENTFERM-PWY]], pyruvate fermentation to butanoate: [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY] | ||
+ | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
+ | </div> | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21039 21039] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00238 R00238] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q8CAY6 Q8CAY6] | ||
+ | ** [http://www.uniprot.org/uniprot/P41338 P41338] | ||
+ | ** [http://www.uniprot.org/uniprot/P45362 P45362] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9BWD1 Q9BWD1] | ||
+ | ** [http://www.uniprot.org/uniprot/P45359 P45359] | ||
+ | ** [http://www.uniprot.org/uniprot/P24752 P24752] | ||
+ | ** [http://www.uniprot.org/uniprot/Q12598 Q12598] | ||
+ | ** [http://www.uniprot.org/uniprot/P45369 P45369] | ||
+ | ** [http://www.uniprot.org/uniprot/P46707 P46707] | ||
+ | ** [http://www.uniprot.org/uniprot/P73825 P73825] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43637 Q43637] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UQW6 Q9UQW6] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z3Y4 Q9Z3Y4] | ||
+ | ** [http://www.uniprot.org/uniprot/P77852 P77852] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9XD81 Q9XD81] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZGI9 Q9ZGI9] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9L8E0 Q9L8E0] | ||
+ | ** [http://www.uniprot.org/uniprot/P14611 P14611] | ||
+ | ** [http://www.uniprot.org/uniprot/P07097 P07097] | ||
+ | ** [http://www.uniprot.org/uniprot/P17764 P17764] | ||
+ | </div> | ||
{{#set: direction=reversible}} | {{#set: direction=reversible}} | ||
− | {{#set: nb gene associated= | + | {{#set: common-name=acetyl-coa acetyltransferase}} |
− | {{#set: nb pathway associated= | + | {{#set: ec-number=ec-2.3.1.9}} |
− | {{#set: reconstruction category= | + | {{#set: nb gene associated=3}} |
− | {{#set: reconstruction tool= | + | {{#set: nb pathway associated=24}} |
− | {{#set: reconstruction comment= | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction source= | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}} |
Revision as of 09:31, 27 August 2019
Contents
Reaction ACETYL-COA-ACETYLTRANSFER-RXN
- direction:
- reversible
- common-name:
- acetyl-coa acetyltransferase
- ec-number:
Reaction formula
- 2 ACETYL-COA[c] <=> 1 ACETOACETYL-COA[c] + 1 CO-A[c]
Gene(s) associated with this reaction
- Gene: SJ09371
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ14898
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ21818
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-6174, mevalonate pathway II (archaea): PWY-6174
- 6 reactions found over 7 reactions in the full pathway
- PWY-6883, pyruvate fermentation to butanol II (engineered): PWY-6883
- 5 reactions found over 6 reactions in the full pathway
- PWY-6876, isopropanol biosynthesis (engineered): PWY-6876
- 2 reactions found over 5 reactions in the full pathway
- ACETOACETATE-DEG-PWY, acetoacetate degradation (to acetyl CoA): ACETOACETATE-DEG-PWY
- 1 reactions found over 2 reactions in the full pathway
- PWY-5177, glutaryl-CoA degradation: PWY-5177
- 5 reactions found over 5 reactions in the full pathway
- PWY-6588, pyruvate fermentation to acetone: PWY-6588
- 2 reactions found over 5 reactions in the full pathway
- PWY-922, mevalonate pathway I: PWY-922
- 7 reactions found over 7 reactions in the full pathway
- PWY-6583, pyruvate fermentation to butanol I: PWY-6583
- 6 reactions found over 8 reactions in the full pathway
- PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle: PWY-5789
- 8 reactions found over 18 reactions in the full pathway
- PWY1-3, polyhydroxybutanoate biosynthesis: PWY1-3
- 2 reactions found over 3 reactions in the full pathway
- PWY-7216, (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered): PWY-7216
- 3 reactions found over 5 reactions in the full pathway
- PWY-7401, crotonate fermentation (to acetate and cyclohexane carboxylate): PWY-7401
- 6 reactions found over 15 reactions in the full pathway
- PWY-7391, isoprene biosynthesis II (engineered): PWY-7391
- 7 reactions found over 8 reactions in the full pathway
- P162-PWY, L-glutamate degradation V (via hydroxyglutarate): P162-PWY
- 7 reactions found over 11 reactions in the full pathway
- PWY-5741, ethylmalonyl-CoA pathway: PWY-5741
- 2 reactions found over 11 reactions in the full pathway
- PWY-6863, pyruvate fermentation to hexanol (engineered): PWY-6863
- 9 reactions found over 11 reactions in the full pathway
- P163-PWY, L-lysine fermentation to acetate and butanoate: P163-PWY
- 3 reactions found over 10 reactions in the full pathway
- PWY-7779, methyl tert-butyl ether degradation: PWY-7779
- 2 reactions found over 10 reactions in the full pathway
- PWY-7778, 2-methylpropene degradation: PWY-7778
- 3 reactions found over 8 reactions in the full pathway
- PWY-7524, mevalonate pathway III (archaea): PWY-7524
- 5 reactions found over 8 reactions in the full pathway
- PWY66-368, ketolysis: PWY66-368
- 2 reactions found over 3 reactions in the full pathway
- PWY66-367, ketogenesis: PWY66-367
- 4 reactions found over 5 reactions in the full pathway
- PWY-5676, acetyl-CoA fermentation to butanoate II: PWY-5676
- 4 reactions found over 5 reactions in the full pathway
- CENTFERM-PWY, pyruvate fermentation to butanoate: CENTFERM-PWY
- 5 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links