Difference between revisions of "CYSTEINE-AMINOTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-7693 == * direction: ** reversible * common-name: ** alcohol dehydrogenase (nad) ** 3-methylbutanol dehydrogenase * ec-number: ** [http:/...")
(Created page with "Category:reaction == Reaction UGD-RXN == * direction: ** left-to-right * common-name: ** udp-glucose 6-dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.22...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7693 ==
+
== Reaction UGD-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** alcohol dehydrogenase (nad)
+
** udp-glucose 6-dehydrogenase
−
** 3-methylbutanol dehydrogenase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.1 ec-1.1.1.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.22 ec-1.1.1.22]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-7032]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-7031]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-12575]][c] '''+''' 2 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[NADH]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[UDP-GLUCURONATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21601]]
+
* Gene: [[SJ16894]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ14768]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03911]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11024]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ07759]]
+
* Gene: [[SJ11033]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11025]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered):
+
* [[PWY-7346]], UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose):
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-5076]], L-leucine degradation III:
+
* [[PWY-7820]], teichuronic acid biosynthesis (B. subtilis 168):
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23597 23597]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05685 R05685]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00286 R00286]
−
{{#set: direction=reversible}}
+
* UNIPROT:
−
{{#set: common-name=alcohol dehydrogenase (nad)|3-methylbutanol dehydrogenase}}
+
** [http://www.uniprot.org/uniprot/Q8NKX0 Q8NKX0]
−
{{#set: ec-number=ec-1.1.1.1}}
+
** [http://www.uniprot.org/uniprot/Q9PML6 Q9PML6]
−
{{#set: nb gene associated=3}}
+
** [http://www.uniprot.org/uniprot/Q58454 Q58454]
 +
** [http://www.uniprot.org/uniprot/Q47329 Q47329]
 +
** [http://www.uniprot.org/uniprot/Q96558 Q96558]
 +
** [http://www.uniprot.org/uniprot/O41091 O41091]
 +
** [http://www.uniprot.org/uniprot/Q9RMC2 Q9RMC2]
 +
** [http://www.uniprot.org/uniprot/O54068 O54068]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=udp-glucose 6-dehydrogenase}}
 +
{{#set: ec-number=ec-1.1.1.22}}
 +
{{#set: nb gene associated=5}}
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:22, 15 January 2021

Reaction UGD-RXN

  • direction:
    • left-to-right
  • common-name:
    • udp-glucose 6-dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7346, UDP-α-D-glucuronate biosynthesis (from UDP-glucose):
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7820, teichuronic acid biosynthesis (B. subtilis 168):
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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