Difference between revisions of "CYSTEINE-AMINOTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12244 RXN-12244] == * direction: ** left-to-right * common-name: ** 15-cis-phytoene desaturase...")
(Created page with "Category:reaction == Reaction CYSTEINE-AMINOTRANSFERASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.3 ec-2.6.1.3] == Reaction form...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12244 RXN-12244] ==
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== Reaction CYSTEINE-AMINOTRANSFERASE-RXN ==
 
* direction:
 
* direction:
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** left-to-right
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** reversible
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* common-name:
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* ec-number:
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** 15-cis-phytoene desaturase
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** [http://enzyme.expasy.org/EC/2.6.1.3 ec-2.6.1.3]
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** 15,9'-di-cis phytofluene desaturase
 
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* synonymous:
 
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** plant-type phytoene desaturase
 
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** phytoene desaturase (ambiguous)
 
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** pds
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-13171]][c] '''+''' 1 [[PLASTOQUINONE]][c] '''=>''' 1 [[CPD-7535]][c] '''+''' 1 [[Plastoquinols]][c]
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* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CYS]][c] '''<=>''' 1 [[3-MERCAPTO-PYRUVATE]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ08891]]
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* Gene: [[SJ07646]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07466]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
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* [[PWY0-1534]]:
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** '''8''' reactions found over '''8''' reactions in the full pathway
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** '''1''' reactions found over '''n.a''' reactions in the full pathway
 +
* [[PWY-5329]], L-cysteine degradation III:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR96990
 
* RHEA:
 
* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30198 30198]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17444 17444]
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{{#set: direction=left-to-right}}
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* LIGAND-RXN:
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{{#set: common-name=15-cis-phytoene desaturase|15,9'-di-cis phytofluene desaturase}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00895 R00895]
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{{#set: synonymous=pds|plant-type phytoene desaturase|phytoene desaturase (ambiguous)}}
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{{#set: direction=reversible}}
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{{#set: nb gene associated=1}}
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{{#set: ec-number=ec-2.6.1.3}}
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{{#set: nb pathway associated=1}}
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{{#set: nb gene associated=2}}
−
{{#set: reconstruction category=annotation}}
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{{#set: nb pathway associated=2}}
−
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Latest revision as of 11:20, 18 March 2021

Reaction CYSTEINE-AMINOTRANSFERASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1534:
    • 1 reactions found over n.a reactions in the full pathway
  • PWY-5329, L-cysteine degradation III:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR96990
  • RHEA:
  • LIGAND-RXN:





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