Difference between revisions of "Category:Pathway"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12160 RXN-12160] == * direction: ** left-to-right * common-name: ** 2-polyprenyl-6-hydroxypheny...")
 
(Created page with "{{#ask: Category:pathway | ?common-name | ?nb reaction found | ?nb total reaction | ?completion rate |sort=completion rate, nb total reaction |order=descending }}")
 
(9 intermediate revisions by 5 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
{{#ask: [[Category:pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12160 RXN-12160] ==
+
| ?common-name
−
* direction:
+
| ?nb reaction found
−
** left-to-right
+
| ?nb total reaction
−
* common-name:
+
| ?completion rate
−
** 2-polyprenyl-6-hydroxyphenyl methylase
+
|sort=completion rate, nb total reaction
−
** 2-polyprenyl-6-hydroxyphenol methylase
+
|order=descending
−
* ec-number:
+
}}
−
** [http://enzyme.expasy.org/EC/2.1.1.222 ec-2.1.1.222]
 
−
== Reaction formula ==
 
−
* 1 [[3-Polyrenyl-benzene-1-2-diols]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[2-Methoxy-6-polyprenyl-phenols]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
 
−
== Gene(s) associated with this reaction ==
 
−
* Gene: [[SJ16864]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ13007]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
== Pathway(s)  ==
 
−
== Reconstruction information  ==
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
== External links  ==
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R08769 R08769]
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31414 31414]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=2-polyprenyl-6-hydroxyphenyl methylase|2-polyprenyl-6-hydroxyphenol methylase}}
 
−
{{#set: ec-number=ec-2.1.1.222}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=0}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Latest revision as of 11:18, 18 March 2021

 Common-nameNb reaction foundNb total reactionCompletion rate
PWY-7233Ubiquinol-6 bypass biosynthesis (eukaryotic)3N.aN.a
PWY-7243Pectin degradation i1N.aN.a
PWY-7235Superpathway of ubiquinol-6 biosynthesis (eukaryotic)2N.aN.a
PWY-6115Avenacin biosynthesis, initial reactions1N.aN.a
PWY-6305Putrescine biosynthesis iv4N.aN.a
PWY-6196D-serine metabolism1N.aN.a
PWY0-661Prpp biosynthesis ii1N.aN.a
PWY0-1534Hydrogen sulfide biosynthesis i1N.aN.a
P224-PWYSulfate reduction v (dissimilatory, to thiosulfate)2N.aN.a
PWY-82382N.aN.a
PWY-5965Fatty acid biosynthesis initiation iii1N.aN.a
PWY0-1415Superpathway of heme b biosynthesis from uroporphyrinogen-iii4N.aN.a
PWY-5966Fatty acid biosynthesis initiation ii2N.aN.a
PWY66-422D-galactose degradation v (leloir pathway)5N.aN.a
PWY-3221Dtdp-l-rhamnose biosynthesis ii1N.aN.a
PWY-5664Erythro-tetrahydrobiopterin biosynthesis ii2N.aN.a
PWY66-4Cholesterol biosynthesis iii (via desmosterol)1243.0
PWY-7432L-phenylalanine biosynthesis iii (cytosolic, plants)321.5
PWY-4981L-proline biosynthesis ii (from arginine)321.5
PWY-5750Itaconate biosynthesis321.5
PWY-3341L-proline biosynthesis iii431.33
PWY-7219Adenosine ribonucleotides de novo biosynthesis431.33
PWY-7118Chitin degradation to ethanol541.25
PWY-5913Partial tca cycle (obligate autotrophs)1081.25
PWY-882L-ascorbate biosynthesis i (l-galactose pathway)651.2
PWY-6163Chorismate biosynthesis from 3-dehydroquinate651.2
PWY-6823Molybdenum cofactor biosynthesis761.17
PWY-6969Tca cycle v (2-oxoglutarate:ferredoxin oxidoreductase)1091.11
P105-PWYTca cycle iv (2-oxoglutarate decarboxylase)1091.11
PWY-58864-hydroxyphenylpyruvate biosynthesis111.0
GLUTSYNIII-PWYL-glutamate biosynthesis iii111.0
GLUCONSUPER-PWYD-gluconate degradation111.0
PWY-5143Long-chain fatty acid activation111.0
BGALACT-PWYLactose degradation iii111.0
GLYSYN-ALA-PWYGlycine biosynthesis iii111.0
OCTOPINEDEG-PWYOctopine degradation111.0
GLYCOLYSIS-TCA-GLYOX-BYPASSSuperpathway of glycolysis, pyruvate dehydrogenase, tca, and glyoxylate bypass111.0
PWY-5704Urea degradation ii111.0
PWY-6012-1Acyl carrier protein activation111.0
PWY-4341L-glutamate biosynthesis v111.0
PWY-7346Udp-α-d-glucuronate biosynthesis (from udp-glucose)111.0
GLYSYN-THR-PWYGlycine biosynthesis iv111.0
PWY-5490Paraoxon degradation111.0
PWY-6173Histamine biosynthesis111.0
PWY-7344Udp-α-d-galactose biosynthesis111.0
PHENYLALANINE-DEG1-PWYL-phenylalanine degradation i (aerobic)111.0
PWY3O-246(r,r)-butanediol degradation111.0
PWY-7806Glyphosate degradation ii111.0
PWY-4861Udp-α-d-galacturonate biosynthesis i (from udp-d-glucuronate)111.0
PWY-6745Phytochelatins biosynthesis111.0
... further results

Pages in category "Pathway"

The following 200 pages are in this category, out of 1,391 total.

(previous page) (next page)

P

3

A

C

R

D

G

X

H

M

E

T

S

L

N

B

(previous page) (next page)
Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=Category:Pathway&oldid=139838"