Difference between revisions of "Charged-ARG-tRNAs"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14046 RXN-14046] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:gene == Gene SJ09694 == * transcription-direction: ** negative * right-end-position: ** 21027 * left-end-position: ** 15741 * centisome-position: ** 42.13668...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14046 RXN-14046] ==
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== Gene SJ09694 ==
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* direction:
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* transcription-direction:
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** left-to-right
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** negative
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* ec-number:
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* right-end-position:
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** [http://enzyme.expasy.org/EC/3.1.3.74 ec-3.1.3.74]
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** 21027
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== Reaction formula ==
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* left-end-position:
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* 1 [[PYRIDOXAMINE-5P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PYRIDOXAMINE]][c] '''+''' 1 [[Pi]][c]
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** 15741
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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* Gene: [[SJ21090]]
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** 42.13668   
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== Organism(s) associated with this gene  ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) associated ==
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* [[RXN-11783]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s)  ==
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* [[RXN-11989]]
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* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
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** Category: [[orthology]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Reconstruction information  ==
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* [[RXN-11999]]
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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== External links  ==
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* RHEA:
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== Pathway(s) associated ==
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25137 25137]
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* [[PWY-6681]]
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{{#set: direction=left-to-right}}
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** '''3''' reactions found over '''7''' reactions in the full pathway
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{{#set: ec-number=ec-3.1.3.74}}
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{{#set: transcription-direction=negative}}
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{{#set: nb gene associated=1}}
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{{#set: right-end-position=21027}}
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{{#set: left-end-position=15741}}
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{{#set: centisome-position=42.13668    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=3}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 09:28, 27 August 2019

Gene SJ09694

  • transcription-direction:
    • negative
  • right-end-position:
    • 21027
  • left-end-position:
    • 15741
  • centisome-position:
    • 42.13668

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6681
    • 3 reactions found over 7 reactions in the full pathway




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