Difference between revisions of "Charged-THR-tRNAs"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12610 RXN-12610] == * direction: ** left-to-right * common-name: ** thiamine phosphate synthase...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3341 RXN-3341] == * direction: ** left-to-right * common-name: ** 6-phosphogluconate dehydrogen...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12610 RXN-12610] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3341 RXN-3341] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** thiamine phosphate synthase
+
** 6-phosphogluconate dehydrogenase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.5.1.3 ec-2.5.1.3]
+
** [http://enzyme.expasy.org/EC/1.1.1.343 ec-1.1.1.343]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c] '''+''' 1 [[CPD-13576]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[THIAMINE-P]][c]
+
* 1 [[CPD-2961]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[RIBULOSE-5P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ18183]]
+
* Gene: [[SJ11912]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ20500]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6907]], thiamine diphosphate biosynthesis III (Staphylococcus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6907 PWY-6907]
+
* [[RUMP-PWY]], formaldehyde oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY]
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
* [[PWY-6893]], thiamine diphosphate biosynthesis II (Bacillus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6893 PWY-6893]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=47849 47849]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33024 33024]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=thiamine phosphate synthase}}
+
{{#set: common-name=6-phosphogluconate dehydrogenase}}
{{#set: ec-number=ec-2.5.1.3}}
+
{{#set: ec-number=ec-1.1.1.343}}
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:29, 27 August 2019

Reaction RXN-3341

  • direction:
    • left-to-right
  • common-name:
    • 6-phosphogluconate dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • RUMP-PWY, formaldehyde oxidation I: RUMP-PWY
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links