Difference between revisions of "Curation"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.23.15-RXN 3.4.23.15-RXN] == * direction: ** left-to-right * common-name: ** renin-2 * ec-number...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.17-RXN 2.1.1.17-RXN] == * direction: ** left-to-right * common-name: ** phosphatidylethanolam...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.17-RXN 2.1.1.17-RXN] == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** phosphatidylethanolamine n-methyltransferase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.1.1.17 ec-2.1.1.17] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[L-1-PHOSPHATIDYL-ETHANOLAMINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-405]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ21370]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-6825]], phosphatidylcholine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6825 PWY-6825] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11165 11165] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R02056 R02056] | ||
* UNIPROT: | * UNIPROT: | ||
| − | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P05374 P05374] |
| − | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q05197 Q05197] |
| − | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q08388 Q08388] |
| − | |||
| − | |||
| − | |||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=phosphatidylethanolamine n-methyltransferase}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-2.1.1.17}} |
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome}} | {{#set: reconstruction source=saccharina_japonica_genome}} | ||
Revision as of 09:29, 27 August 2019
Contents
Reaction 2.1.1.17-RXN
- direction:
- left-to-right
- common-name:
- phosphatidylethanolamine n-methyltransferase
- ec-number:
Reaction formula
- 1 L-1-PHOSPHATIDYL-ETHANOLAMINE[c] + 1 S-ADENOSYLMETHIONINE[c] => 1 ADENOSYL-HOMO-CYS[c] + 1 CPD-405[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ21370
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6825, phosphatidylcholine biosynthesis V: PWY-6825
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
