Difference between revisions of "Cyclic-3-5-Nucleoside-Monophosphates"

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(Created page with "Category:gene == Gene SJ02471 == * transcription-direction: ** positive * right-end-position: ** 108786 * left-end-position: ** 102291 * centisome-position: ** 75.81772...")
(Created page with "Category:gene == Gene SJ05644 == * transcription-direction: ** positive * right-end-position: ** 54943 * left-end-position: ** 39039 * centisome-position: ** 43.445213...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02471 ==
+
== Gene SJ05644 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 108786
+
** 54943
 
* left-end-position:
 
* left-end-position:
−
** 102291
+
** 39039
 
* centisome-position:
 
* centisome-position:
−
** 75.81772    
+
** 43.445213    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[NADH-DEHYDROG-A-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ALCD19]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ALCDH_LPAREN_nadp_RPAREN_hi]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ALCDH_LPAREN_nadp_RPAREN_i]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ALCOHOL-DEHYDROGENASE-NADP+-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[ALCOHOL-DEHYDROGENASE-NADPORNOP+-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[ALDEHYDE-REDUCTASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[NADH-DEHYDROGENASE-QUINONE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NADH-DEHYDROGENASE-RXN]]
+
* [[GLUCURONATE-REDUCTASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[R00281]]
+
* [[GLYCEROL-DEHYDROGENASE-NADP+-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-5330]]
+
* [[RXN-10717]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12078]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12484]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14023]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14102]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8772]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8773]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5525]]
−
* [[PWY0-1335]]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY3DJ-35471]]
−
* [[PWY-4302]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-3781]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY0-1334]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6692]]
 
 
** '''3''' reactions found over '''6''' reactions in the full pathway
 
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5083]]
+
* [[PWY-6307]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7279]]
 
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY0-1573]]
+
* [[PWY-6693]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7269]]
+
* [[PWY-7178]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY0-1568]]
+
* [[PWY-5515]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY0-1567]]
+
* [[PWY-5516]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=108786}}
+
{{#set: right-end-position=54943}}
−
{{#set: left-end-position=102291}}
+
{{#set: left-end-position=39039}}
−
{{#set: centisome-position=75.81772   }}
+
{{#set: centisome-position=43.445213   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=15}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=7}}

Revision as of 09:28, 27 August 2019

Gene SJ05644

  • transcription-direction:
    • positive
  • right-end-position:
    • 54943
  • left-end-position:
    • 39039
  • centisome-position:
    • 43.445213

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5525
    • 2 reactions found over 5 reactions in the full pathway
  • PWY3DJ-35471
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-6307
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6693
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7178
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5515
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5516
    • 1 reactions found over 1 reactions in the full pathway




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