Difference between revisions of "Cytosine2278-in-25S-rRNA"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-323 RXN66-323] == * direction: ** left-to-right * common-name: ** cholesterol:nadp+ δ7...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCHMSSELCYSLh SUCHMSSELCYSLh] == * direction: ** left-to-right * common-name: ** o-succinyl-l-homo...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-323 RXN66-323] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCHMSSELCYSLh SUCHMSSELCYSLh] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** cholesterol:nadp+ δ7 -oxidoreductase
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** o-succinyl-l-homoserine succinate-lyase (adding cysteine), chloroplast
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* ec-number:
 
−
** [http://enzyme.expasy.org/EC/1.3.1.21 ec-1.3.1.21]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[CPD-4187]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CHOLESTEROL]][c] '''+''' 1 [[NADP]][c]
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* 1.0 [[L-SELENOCYSTEINE]][h] '''+''' 1.0 [[O-SUCCINYL-L-HOMOSERINE]][h] '''=>''' 1.0 [[CPD-13717]][h] '''+''' 1.0 [[SUC]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02661]]
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* Gene: [[SJ20026]]
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY66-341]], cholesterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-341 PWY66-341]
 
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** '''14''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY66-3]], cholesterol biosynthesis II (via 24,25-dihydrolanosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-3 PWY66-3]
 
−
** '''12''' reactions found over '''18''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23984 23984]
 
−
* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01456 R01456]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=cholesterol:nadp+ δ7 -oxidoreductase}}
+
{{#set: common-name=o-succinyl-l-homoserine succinate-lyase (adding cysteine), chloroplast}}
−
{{#set: ec-number=ec-1.3.1.21}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 09:29, 27 August 2019

Reaction SUCHMSSELCYSLh

  • direction:
    • left-to-right
  • common-name:
    • o-succinyl-l-homoserine succinate-lyase (adding cysteine), chloroplast

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=Cytosine2278-in-25S-rRNA&oldid=34828"