Difference between revisions of "D-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN"

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(Created page with "Category:reaction == Reaction 1.17.99.3-RXN == * direction: ** reversible * common-name: ** peroxisomal acyl-coenzyme a oxidase * ec-number: ** [http://enzyme.expasy.org/E...")
(Created page with "Category:reaction == Reaction ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN == * direction: ** reversible * common-name: ** aspartate semialdehyde dehydrogenase * ec-number: **...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1.17.99.3-RXN ==
+
== Reaction ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** peroxisomal acyl-coenzyme a oxidase
+
** aspartate semialdehyde dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.17.99.3 ec-1.17.99.3]
+
** [http://enzyme.expasy.org/EC/1.2.1.11 ec-1.2.1.11]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Acceptor]][c] '''+''' 1 [[CPD-71]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[CPD-7275]][c] '''+''' 1 [[Donor-H2]][c]
+
* 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[L-BETA-ASPARTYL-P]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07452]]
+
* Gene: [[SJ08677]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5097]], L-lysine biosynthesis VI:
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6559]], spermidine biosynthesis II:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[P101-PWY]], ectoine biosynthesis:
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-2941]], L-lysine biosynthesis II:
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-2942]], L-lysine biosynthesis III:
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6562]], norspermidine biosynthesis:
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7153]], grixazone biosynthesis:
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15733 15733]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24287 24287]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07374 R07374]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02291 R02291]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P10539 P10539]
 +
** [http://www.uniprot.org/uniprot/P41394 P41394]
 +
** [http://www.uniprot.org/uniprot/P44801 P44801]
 +
** [http://www.uniprot.org/uniprot/O67716 O67716]
 +
** [http://www.uniprot.org/uniprot/Q59291 Q59291]
 +
** [http://www.uniprot.org/uniprot/P57008 P57008]
 +
** [http://www.uniprot.org/uniprot/P0A9Q9 P0A9Q9]
 +
** [http://www.uniprot.org/uniprot/O25801 O25801]
 +
** [http://www.uniprot.org/uniprot/Q57658 Q57658]
 +
** [http://www.uniprot.org/uniprot/Q04797 Q04797]
 +
** [http://www.uniprot.org/uniprot/Q56732 Q56732]
 +
** [http://www.uniprot.org/uniprot/Q56734 Q56734]
 +
** [http://www.uniprot.org/uniprot/P13663 P13663]
 +
** [http://www.uniprot.org/uniprot/P23247 P23247]
 +
** [http://www.uniprot.org/uniprot/P41399 P41399]
 +
** [http://www.uniprot.org/uniprot/P41404 P41404]
 +
** [http://www.uniprot.org/uniprot/Q9JN40 Q9JN40]
 +
** [http://www.uniprot.org/uniprot/P26511 P26511]
 +
** [http://www.uniprot.org/uniprot/Q55512 Q55512]
 +
</div>
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=peroxisomal acyl-coenzyme a oxidase}}
+
{{#set: common-name=aspartate semialdehyde dehydrogenase}}
−
{{#set: ec-number=ec-1.17.99.3}}
+
{{#set: ec-number=ec-1.2.1.11}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=9}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:18, 14 January 2021

Reaction ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN

  • direction:
    • reversible
  • common-name:
    • aspartate semialdehyde dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5097, L-lysine biosynthesis VI:
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6559, spermidine biosynthesis II:
    • 2 reactions found over 4 reactions in the full pathway
  • P101-PWY, ectoine biosynthesis:
    • 2 reactions found over 5 reactions in the full pathway
  • DAPLYSINESYN-PWY, L-lysine biosynthesis I:
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-2941, L-lysine biosynthesis II:
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-2942, L-lysine biosynthesis III:
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6562, norspermidine biosynthesis:
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7153, grixazone biosynthesis:
    • 4 reactions found over 8 reactions in the full pathway
  • HOMOSERSYN-PWY, L-homoserine biosynthesis:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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