Difference between revisions of "D-mannopyranose"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2464 RXN-2464] == * direction: ** reversible * common-name: ** 4-hydroxy-4-methyl-2-oxoglutarat...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15041 RXN-15041] == * direction: ** left-to-right * common-name: ** d-aminoacyl-trna deacylase...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2464 RXN-2464] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15041 RXN-15041] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** 4-hydroxy-4-methyl-2-oxoglutarate aldolase
+
** d-aminoacyl-trna deacylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.3.17 ec-4.1.3.17]
+
** [http://enzyme.expasy.org/EC/3.1.1.96 ec-3.1.1.96]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[4-OH-4-ACETYL-2-OXOGLUTARATE]][c] '''<=>''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[D-aminoacyl-tRNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-Amino-Acids]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[tRNAs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13180]]
+
* Gene: [[SJ01789]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P184-PWY]], protocatechuate degradation I (meta-cleavage pathway): [http://metacyc.org/META/NEW-IMAGE?object=P184-PWY P184-PWY]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[GALLATE-DEGRADATION-II-PWY]], gallate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GALLATE-DEGRADATION-II-PWY GALLATE-DEGRADATION-II-PWY]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[GALLATE-DEGRADATION-I-PWY]], gallate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=GALLATE-DEGRADATION-I-PWY GALLATE-DEGRADATION-I-PWY]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[METHYLGALLATE-DEGRADATION-PWY]], methylgallate degradation: [http://metacyc.org/META/NEW-IMAGE?object=METHYLGALLATE-DEGRADATION-PWY METHYLGALLATE-DEGRADATION-PWY]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28938 28938]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13954 13954]
−
* LIGAND-RXN:
+
{{#set: direction=left-to-right}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00350 R00350]
+
{{#set: common-name=d-aminoacyl-trna deacylase}}
−
{{#set: direction=reversible}}
+
{{#set: ec-number=ec-3.1.1.96}}
−
{{#set: common-name=4-hydroxy-4-methyl-2-oxoglutarate aldolase}}
 
−
{{#set: ec-number=ec-4.1.3.17}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:25, 26 August 2019

Reaction RXN-15041

  • direction:
    • left-to-right
  • common-name:
    • d-aminoacyl-trna deacylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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