Difference between revisions of "D-mannopyranose"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15041 RXN-15041] == * direction: ** left-to-right * common-name: ** d-aminoacyl-trna deacylase...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTERIDINEPYROPHOSPHOKIN-RXN H2PTERIDINEPYROPHOSPHOKIN-RXN] == * direction: ** left-to-right * com...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15041 RXN-15041] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTERIDINEPYROPHOSPHOKIN-RXN H2PTERIDINEPYROPHOSPHOKIN-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** d-aminoacyl-trna deacylase
+
** 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.1.96 ec-3.1.1.96]
+
** [http://enzyme.expasy.org/EC/2.7.6.3 ec-2.7.6.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-aminoacyl-tRNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-Amino-Acids]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[tRNAs]][c]
+
* 1 [[AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[DIHYDROPTERIN-CH2OH-PP]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ01789]]
+
* Gene: [[SJ22398]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (Methanocaldococcus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6797 PWY-6797]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7853]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis V (Pyrococcus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7853 PWY-7853]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7852]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7852 PWY-7852]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7539 PWY-7539]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13954 13954]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11413 11413]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03503 R03503]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P22291 P22291]
 +
** [http://www.uniprot.org/uniprot/P26281 P26281]
 +
** [http://www.uniprot.org/uniprot/O84619 O84619]
 +
** [http://www.uniprot.org/uniprot/Q9ZM35 Q9ZM35]
 +
** [http://www.uniprot.org/uniprot/Q9RXY4 Q9RXY4]
 +
** [http://www.uniprot.org/uniprot/O66550 O66550]
 +
** [http://www.uniprot.org/uniprot/O25680 O25680]
 +
** [http://www.uniprot.org/uniprot/Q9PJ54 Q9PJ54]
 +
** [http://www.uniprot.org/uniprot/Q9JV81 Q9JV81]
 +
** [http://www.uniprot.org/uniprot/P64143 P64143]
 +
** [http://www.uniprot.org/uniprot/Q9Z7E8 Q9Z7E8]
 +
** [http://www.uniprot.org/uniprot/P82602 P82602]
 +
** [http://www.uniprot.org/uniprot/P29252 P29252]
 +
** [http://www.uniprot.org/uniprot/P72736 P72736]
 +
** [http://www.uniprot.org/uniprot/O04862 O04862]
 +
** [http://www.uniprot.org/uniprot/Q9SZV3 Q9SZV3]
 +
** [http://www.uniprot.org/uniprot/Q9X8I1 Q9X8I1]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=d-aminoacyl-trna deacylase}}
+
{{#set: common-name=6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase}}
−
{{#set: ec-number=ec-3.1.1.96}}
+
{{#set: ec-number=ec-2.7.6.3}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=5}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}}

Revision as of 09:29, 27 August 2019

Reaction H2PTERIDINEPYROPHOSPHOKIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6797, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (Methanocaldococcus): PWY-6797
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7853, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis V (Pyrococcus): PWY-7853
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7852, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium): PWY-7852
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7539, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): PWY-7539
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6147, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: PWY-6147
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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