Difference between revisions of "DAHPSYN-RXN"

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(Created page with "Category:reaction == Reaction HOLOCYTOCHROME-C-SYNTHASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/4.4.1.17 ec-4.4.1.17] == Reaction fo...")
(Created page with "Category:reaction == Reaction DAHPSYN-RXN == * direction: ** reversible * common-name: ** 2-dehydro-3-deoxyphosphoheptonate aldolase * ec-number: ** [http://enzyme.expasy....")
 
(5 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction HOLOCYTOCHROME-C-SYNTHASE-RXN ==
+
== Reaction DAHPSYN-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 +
* common-name:
 +
** 2-dehydro-3-deoxyphosphoheptonate aldolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.4.1.17 ec-4.4.1.17]
+
** [http://enzyme.expasy.org/EC/2.5.1.54 ec-2.5.1.54]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Cytochromes-c]][c] '''<=>''' 1 [[Apocytochromes-c]][c] '''+''' 1 [[HEME_C]][c]
+
* 1 [[ERYTHROSE-4P]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20234]]
+
* Gene: [[SJ04251]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ00174]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6164]], 3-dehydroquinate biosynthesis I:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR97218
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22651 22651]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14720 14720]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02480 R02480]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01826 R01826]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P06182 P06182]
+
** [http://www.uniprot.org/uniprot/P0A1B5 P0A1B5]
−
** [http://www.uniprot.org/uniprot/P14187 P14187]
+
** [http://www.uniprot.org/uniprot/Q9JSQ8 Q9JSQ8]
−
** [http://www.uniprot.org/uniprot/O25044 O25044]
+
** [http://www.uniprot.org/uniprot/P00887 P00887]
−
** [http://www.uniprot.org/uniprot/O83139 O83139]
+
** [http://www.uniprot.org/uniprot/P0AB91 P0AB91]
−
** [http://www.uniprot.org/uniprot/P45706 P45706]
+
** [http://www.uniprot.org/uniprot/P00888 P00888]
−
** [http://www.uniprot.org/uniprot/Q9ZMH0 Q9ZMH0]
+
** [http://www.uniprot.org/uniprot/Q9PPJ1 Q9PPJ1]
−
** [http://www.uniprot.org/uniprot/P44202 P44202]
+
** [http://www.uniprot.org/uniprot/P46245 P46245]
−
** [http://www.uniprot.org/uniprot/P53701 P53701]
+
** [http://www.uniprot.org/uniprot/P35170 P35170]
−
** [http://www.uniprot.org/uniprot/Q00873 Q00873]
+
** [http://www.uniprot.org/uniprot/P44303 P44303]
 +
** [http://www.uniprot.org/uniprot/P34725 P34725]
 +
** [http://www.uniprot.org/uniprot/P39912 P39912]
 +
** [http://www.uniprot.org/uniprot/P14843 P14843]
 +
** [http://www.uniprot.org/uniprot/Q02285 Q02285]
 +
** [http://www.uniprot.org/uniprot/P32449 P32449]
 +
** [http://www.uniprot.org/uniprot/P37215 P37215]
 +
** [http://www.uniprot.org/uniprot/P37216 P37216]
 +
** [http://www.uniprot.org/uniprot/Q09755 Q09755]
 +
** [http://www.uniprot.org/uniprot/Q00218 Q00218]
 +
** [http://www.uniprot.org/uniprot/P29976 P29976]
 +
** [http://www.uniprot.org/uniprot/Q42921 Q42921]
 +
** [http://www.uniprot.org/uniprot/O22407 O22407]
 +
** [http://www.uniprot.org/uniprot/O52798 O52798]
 +
</div>
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: ec-number=ec-4.4.1.17}}
+
{{#set: common-name=2-dehydro-3-deoxyphosphoheptonate aldolase}}
−
{{#set: nb gene associated=2}}
+
{{#set: ec-number=ec-2.5.1.54}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction DAHPSYN-RXN

  • direction:
    • reversible
  • common-name:
    • 2-dehydro-3-deoxyphosphoheptonate aldolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6164, 3-dehydroquinate biosynthesis I:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=DAHPSYN-RXN&oldid=141731"