Difference between revisions of "DAHPSYN-RXN"
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(Created page with "Category:reaction == Reaction HOLOCYTOCHROME-C-SYNTHASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/4.4.1.17 ec-4.4.1.17] == Reaction fo...") |
(Created page with "Category:reaction == Reaction DAHPSYN-RXN == * direction: ** reversible * common-name: ** 2-dehydro-3-deoxyphosphoheptonate aldolase * ec-number: ** [http://enzyme.expasy....") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction DAHPSYN-RXN == |
* direction: | * direction: | ||
** reversible | ** reversible | ||
+ | * common-name: | ||
+ | ** 2-dehydro-3-deoxyphosphoheptonate aldolase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.5.1.54 ec-2.5.1.54] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ERYTHROSE-4P]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ04251]] |
− | |||
− | |||
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-6164]], 3-dehydroquinate biosynthesis I: | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * METANETX-RXN : MNXR97218 | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14720 14720] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01826 R01826] |
* UNIPROT: | * UNIPROT: | ||
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P0A1B5 P0A1B5] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q9JSQ8 Q9JSQ8] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P00887 P00887] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P0AB91 P0AB91] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P00888 P00888] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q9PPJ1 Q9PPJ1] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P46245 P46245] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P35170 P35170] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P44303 P44303] |
+ | ** [http://www.uniprot.org/uniprot/P34725 P34725] | ||
+ | ** [http://www.uniprot.org/uniprot/P39912 P39912] | ||
+ | ** [http://www.uniprot.org/uniprot/P14843 P14843] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02285 Q02285] | ||
+ | ** [http://www.uniprot.org/uniprot/P32449 P32449] | ||
+ | ** [http://www.uniprot.org/uniprot/P37215 P37215] | ||
+ | ** [http://www.uniprot.org/uniprot/P37216 P37216] | ||
+ | ** [http://www.uniprot.org/uniprot/Q09755 Q09755] | ||
+ | ** [http://www.uniprot.org/uniprot/Q00218 Q00218] | ||
+ | ** [http://www.uniprot.org/uniprot/P29976 P29976] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42921 Q42921] | ||
+ | ** [http://www.uniprot.org/uniprot/O22407 O22407] | ||
+ | ** [http://www.uniprot.org/uniprot/O52798 O52798] | ||
+ | </div> | ||
{{#set: direction=reversible}} | {{#set: direction=reversible}} | ||
− | {{#set: ec-number=ec- | + | {{#set: common-name=2-dehydro-3-deoxyphosphoheptonate aldolase}} |
− | {{#set: nb gene associated= | + | {{#set: ec-number=ec-2.5.1.54}} |
− | {{#set: nb pathway associated= | + | {{#set: nb gene associated=1}} |
− | {{#set: reconstruction category=annotation | + | {{#set: nb pathway associated=1}} |
+ | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction tool=pathwaytools|pantograph}} | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}} |
Latest revision as of 11:21, 18 March 2021
Contents
Reaction DAHPSYN-RXN
- direction:
- reversible
- common-name:
- 2-dehydro-3-deoxyphosphoheptonate aldolase
- ec-number:
Reaction formula
- 1 ERYTHROSE-4P[c] + 1 PHOSPHO-ENOL-PYRUVATE[c] + 1 WATER[c] <=> 1 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P[c] + 1 Pi[c]
Gene(s) associated with this reaction
- Gene: SJ04251
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6164, 3-dehydroquinate biosynthesis I:
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
External links