Difference between revisions of "DAOTO"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-1239 tax-12...")
(Created page with "Category:reaction == Reaction 2.7.11.24-RXN == * direction: ** reversible * common-name: ** map kinase ** protein kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817] ==
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== Reaction 2.7.11.24-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-1239 tax-1239]
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** reversible
 
* common-name:
 
* common-name:
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** type i lipoteichoic acid biosynthesis (s. aureus)
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** map kinase
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== Reaction(s) found ==
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** protein kinase
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* [[CDPDIGLYSYN-RXN]]
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* ec-number:
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* [[DIACYLGLYKIN-RXN]]
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** [http://enzyme.expasy.org/EC/2.7.11.24 ec-2.7.11.24]
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* [[GLUC1PURIDYLTRANS-RXN]]
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== Reaction formula ==
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* [[PGPPHOSPHA-RXN]]
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* 1 [[ATP]][c] '''+''' 1 [[Protein-L-Ser-or-L-Thr-L-Pro]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Protein-L-Ser-or-L-Thr-P-L-Pro]][c]
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* [[PHOSPHAGLYPSYN-RXN]]
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== Gene(s) associated with this reaction  ==
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* [[RXN-15117]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) not found ==
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* Gene: [[SJ06000]]
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* [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN-315 TRANS-RXN-315]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16648 RXN-16648]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18036 RXN-18036]
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* Gene: [[SJ00969]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18039 RXN-18039]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18037 RXN-18037]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18013 RXN-18013]
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* Gene: [[SJ02374]]
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* [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN-316 TRANS-RXN-316]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18014 RXN-18014]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18035 RXN-18035]
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* Gene: [[SJ02804]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18038 RXN-18038]
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** Category: [[annotation]]
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{{#set: taxonomic-range=tax-1239}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: common-name=type i lipoteichoic acid biosynthesis (s. aureus)}}
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* Gene: [[SJ03592]]
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{{#set: nb reaction found=6}}
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** Category: [[annotation]]
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{{#set: completion rate=0.38}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: nb total reaction=16}}
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* Gene: [[SJ16326]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ11284]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ12927]]
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** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ16082]]
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** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ12262]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ05934]]
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** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ12260]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ14523]]
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** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ15982]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ02801]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ02805]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ12264]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ22422]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ16021]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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</div>
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== Pathway(s)  ==
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== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== External links  ==
 +
{{#set: direction=reversible}}
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{{#set: common-name=protein kinase|map kinase}}
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{{#set: ec-number=ec-2.7.11.24}}
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{{#set: nb gene associated=19}}
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{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:46, 18 December 2020

Reaction 2.7.11.24-RXN

  • direction:
    • reversible
  • common-name:
    • map kinase
    • protein kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=DAOTO&oldid=51579"