Difference between revisions of "DAPASYN-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5647 PWY-5647] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] *...")
(Created page with "Category:reaction == Reaction DAPASYN-RXN == * direction: ** reversible * common-name: ** 7,8-diaminopelargonic acid synthase * ec-number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5647 PWY-5647] ==
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== Reaction DAPASYN-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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** reversible
 
* common-name:
 
* common-name:
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** 2-nitrobenzoate degradation i
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** 7,8-diaminopelargonic acid synthase
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== Reaction(s) found ==
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* ec-number:
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* [[AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN]]
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** [http://enzyme.expasy.org/EC/2.6.1.62 ec-2.6.1.62]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.13.11.6-RXN 1.13.11.6-RXN]
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* 1 [[8-AMINO-7-OXONONANOATE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''<=>''' 1 [[DIAMINONONANOATE]][c] '''+''' 1 [[S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=4.1.1.77-RXN 4.1.1.77-RXN]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8846 RXN-8846]
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* Gene: [[SJ14599]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8847 RXN-8847]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.32-RXN 1.2.1.32-RXN]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: taxonomic-range=tax-2}}
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** Category: [[orthology]]
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{{#set: common-name=2-nitrobenzoate degradation i}}
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb reaction found=1}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: completion rate=0.17}}
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== Pathway(s) ==
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{{#set: nb total reaction=6}}
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* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I:
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR95806
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16864 16864]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R03231 R03231]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q58696 Q58696]
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** [http://www.uniprot.org/uniprot/P53555 P53555]
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** [http://www.uniprot.org/uniprot/P44426 P44426]
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** [http://www.uniprot.org/uniprot/Q9JV96 Q9JV96]
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** [http://www.uniprot.org/uniprot/Q9PIJ2 Q9PIJ2]
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** [http://www.uniprot.org/uniprot/P46395 P46395]
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** [http://www.uniprot.org/uniprot/P53656 P53656]
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** [http://www.uniprot.org/uniprot/P22805 P22805]
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** [http://www.uniprot.org/uniprot/P45488 P45488]
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** [http://www.uniprot.org/uniprot/P12995 P12995]
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{{#set: direction=reversible}}
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{{#set: common-name=7,8-diaminopelargonic acid synthase}}
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{{#set: ec-number=ec-2.6.1.62}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction DAPASYN-RXN

  • direction:
    • reversible
  • common-name:
    • 7,8-diaminopelargonic acid synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1507, biotin biosynthesis from 8-amino-7-oxononanoate I:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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