Difference between revisions of "DATPtm"

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(Created page with "Category:reaction == Reaction NADPH-DEHYDROGENASE-RXN == * direction: ** reversible * common-name: ** nadph dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.6....")
(Created page with "Category:reaction == Reaction RXN-14528 == * direction: ** left-to-right * common-name: ** 7-(3-amino-3-carboxypropyl)-wyosine methyltransferase * ec-number: ** [http://en...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction NADPH-DEHYDROGENASE-RXN ==
+
== Reaction RXN-14528 ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
** nadph dehydrogenase
+
** 7-(3-amino-3-carboxypropyl)-wyosine methyltransferase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.6.99.1 ec-1.6.99.1]
+
** [http://enzyme.expasy.org/EC/2.1.1.290 ec-2.1.1.290]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Acceptor]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[Donor-H2]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[yW-72]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[yW-58]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ22257]]
+
* Gene: [[SJ13616]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7283]], wybutosine biosynthesis:
 +
** '''3''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13152 13152]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=36904 36904]
* LIGAND-RXN:
+
{{#set: direction=left-to-right}}
** [http://www.genome.jp/dbget-bin/www_bget?R00282 R00282]
+
{{#set: common-name=7-(3-amino-3-carboxypropyl)-wyosine methyltransferase}}
* UNIPROT:
+
{{#set: ec-number=ec-2.1.1.290}}
** [http://www.uniprot.org/uniprot/P43084 P43084]
 
** [http://www.uniprot.org/uniprot/Q02899 Q02899]
 
** [http://www.uniprot.org/uniprot/Q03558 Q03558]
 
** [http://www.uniprot.org/uniprot/P41816 P41816]
 
** [http://www.uniprot.org/uniprot/Q42850 Q42850]
 
** [http://www.uniprot.org/uniprot/P40952 P40952]
 
{{#set: direction=reversible}}
 
{{#set: common-name=nadph dehydrogenase}}
 
{{#set: ec-number=ec-1.6.99.1}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:18, 14 January 2021

Reaction RXN-14528

  • direction:
    • left-to-right
  • common-name:
    • 7-(3-amino-3-carboxypropyl)-wyosine methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7283, wybutosine biosynthesis:
    • 3 reactions found over 2 reactions in the full pathway

Reconstruction information

External links