Difference between revisions of "DCDPKIN-RXN"

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(Created page with "Category:reaction == Reaction NAPHTHOATE-SYN-RXN == * direction: ** left-to-right * common-name: ** 1,4-dihydroxy-2-naphthoyl-coa synthase * ec-number: ** [http://enzyme.e...")
(Created page with "Category:reaction == Reaction TransportSeed-CA+2 == * direction: ** left-to-right == Reaction formula == * 1.0 CA+2[e] '''=>''' 1.0 CA+2[c] == Gene(s) associated w...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction NAPHTHOATE-SYN-RXN ==
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== Reaction TransportSeed-CA+2 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 1,4-dihydroxy-2-naphthoyl-coa synthase
 
−
* ec-number:
 
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** [http://enzyme.expasy.org/EC/4.1.3.36 ec-4.1.3.36]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[CPD-6972]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-9925]][c] '''+''' 1 [[WATER]][c]
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* 1.0 [[CA+2]][e] '''=>''' 1.0 [[CA+2]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ04418]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-5837]], 2-carboxy-1,4-naphthoquinol biosynthesis:
 
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** '''4''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from extracellular to cytosol compartment
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26563 26563]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R07263 R07263]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q9CHK2 Q9CHK2]
 
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** [http://www.uniprot.org/uniprot/P44960 P44960]
 
−
** [http://www.uniprot.org/uniprot/P0ABU0 P0ABU0]
 
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** [http://www.uniprot.org/uniprot/P23966 P23966]
 
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** [http://www.uniprot.org/uniprot/Q59464 Q59464]
 
−
** [http://www.uniprot.org/uniprot/P73495 P73495]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=1,4-dihydroxy-2-naphthoyl-coa synthase}}
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{{#set: nb gene associated=0}}
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{{#set: ec-number=ec-4.1.3.36}}
+
{{#set: nb pathway associated=0}}
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{{#set: nb gene associated=1}}
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{{#set: reconstruction category=manual}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction tool=curation}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction source=import_from_medium}}
−
{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 08:34, 15 March 2021

Reaction TransportSeed-CA+2

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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