Difference between revisions of "DCDPKIN-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15045 RXN-15045] == * direction: ** left-to-right * common-name: ** glycerol-3-phosphate o-acyl...")
(Created page with "Category:reaction == Reaction DSERDEAM-RXN == * direction: ** left-to-right * common-name: ** d-serine ammonia-lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.3.1.18...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15045 RXN-15045] ==
+
== Reaction DSERDEAM-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** glycerol-3-phosphate o-acyltransferase
+
** d-serine ammonia-lyase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.15 ec-2.3.1.15]
+
** [http://enzyme.expasy.org/EC/4.3.1.18 ec-4.3.1.18]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLYCEROL-3P]][c] '''+''' 1 [[OLEOYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[L-1-LYSOPHOSPHATIDATE]][c]
+
* 1 [[D-SERINE]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11668]]
+
* Gene: [[SJ15468]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18504]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7411]], phosphatidate biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7411 PWY-7411]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13978 13978]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00221 R00221]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P00926 P00926]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glycerol-3-phosphate o-acyltransferase}}
+
{{#set: common-name=d-serine ammonia-lyase}}
−
{{#set: ec-number=ec-2.3.1.15}}
+
{{#set: ec-number=ec-4.3.1.18}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:40, 18 December 2020

Reaction DSERDEAM-RXN

  • direction:
    • left-to-right
  • common-name:
    • d-serine ammonia-lyase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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