Difference between revisions of "DCMP-DEAMINASE-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN == * direction: ** left-to-right * common-name: ** gamma-glutamylcyclotransferase * ec-number: ** [http://...")
(Created page with "Category:reaction == Reaction DCMP-DEAMINASE-RXN == * direction: ** left-to-right * common-name: ** dcmp deaminase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4.12 ec...")
 
(5 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN ==
+
== Reaction DCMP-DEAMINASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** gamma-glutamylcyclotransferase
+
** dcmp deaminase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.3.2.9 ec-4.3.2.9]
+
** [http://enzyme.expasy.org/EC/3.5.4.12 ec-3.5.4.12]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[5-L-GLUTAMYL-L-AMINO-ACID]][c] '''=>''' 1 [[5-OXOPROLINE]][c] '''+''' 1 [[L-Amino-Acids]][c]
+
* 1 [[DCMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DUMP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03027]]
+
* Gene: [[SJ20035]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ14104]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ05174]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-4041]], γ-glutamyl cycle:
+
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP:
−
** '''5''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR97185
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20506 20506]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22925 22925]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03749 R03749]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01663 R01663]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P32321 P32321]
 +
** [http://www.uniprot.org/uniprot/P00814 P00814]
 +
** [http://www.uniprot.org/uniprot/P16006 P16006]
 +
** [http://www.uniprot.org/uniprot/P06773 P06773]
 +
** [http://www.uniprot.org/uniprot/O74069 O74069]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=gamma-glutamylcyclotransferase}}
+
{{#set: common-name=dcmp deaminase}}
−
{{#set: ec-number=ec-4.3.2.9}}
+
{{#set: ec-number=ec-3.5.4.12}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction DCMP-DEAMINASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • dcmp deaminase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7210, pyrimidine deoxyribonucleotides biosynthesis from CTP:
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=DCMP-DEAMINASE-RXN&oldid=142141"